Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1454 ATGCTACTAGTTCCCCAAACCCATCAACACGATCACAATCACCATCATGCTAGCCTTCACCTTCTTCCTCATCTTCTTCTCCTCCGTTTCCTCCATTTCCTTCCGTTTCACCTTCTCTCCCACCATCCACCACTCCTTCACGCTCCCTTCCATCAATTCCCTCTCGACCCCTTCACCGATCTGCTTTCTTCCTTCAGGAAATGGGACTCGCGAGTGGGTTGTGATAAATTCAGAGAGAAAACAAATGGGGTTTTGTTGAATCACTCAAAGGTTGTTTCTTTGCAAGAGTTTGGTGTTGGGTGTGGGGGGTTTGAACTTAATCATGTTAGTGTTTTGGTTAAAGAGTGGACTTGGATTCCTGATAATTTGGATAATTGTATTCTTGTCGTGCGCATGGCAAGTGTTTATCATCTTCATTCCAGTAACTGCATCTGCATATGGTATCAAAGATATTATAATCCAACGCAGAGAGTTGGCTCGGTTAGCACAGATACAGATTACTCCAATTCTTCACCATTTTTCAGAATCTTTAGCAGGAGCTGCATCAATACGAGCTTTCGATCAAGAAGGTCGTTTCATGAGCACAAATCTTGTCCTTTTGGATGGCTTCTCAAGGCCGTGTTTCACAATGTGTCTGCAATGGAATGGCTTTCTTTCAGATTGAATTTGCTTTCAAATTTTGTTTCCGCCTTTTCCCTTGTCTTGCTAGTGAGCCTCCCTGAAGGTTTCATCATCAACATAGCAGGGTTGGCAGTAACATATGGAAATCAAAATCTAAATGTCTTGCAAGCTTCAGTTATATGGAACATTTGTAATGCGGAAAACAAGATGATATCAGTTGAAAGAATTCTTCAATATACAAATTTAGCAAGTGAATCACCTCTTGTGATTGAAAACTGTCGGCCACCAAGAAACTGGCCAGAAACTGGAACAATATCTTTCCAAAATTTGCAGATACGTTATGCTGAACATCTCCCATCAGTGCTGAAAAACATCACTTGCACATTTCCTGGAAGGAAGAAAATCGGCGTCGCTCTAGATAAATGTCAGCTAGGTCACCTAGTGAGAGCCATGGATGAGAAGTTGACTCCCCAGAGCCTTACTGAAGAAAGCAGCATATTAGTACTAGATGAAGCAACAGCCTCAGTGGACTCTGCAACTGATGGAGTGATACAGGATATCATCTGTCAAGAGTTCAACATCGAACAGTGTCACAATAGCTCATCAGAATCCACACAGTTATAG 1245 0.4209 MLLVPQTHQHDHNHHHASLHLLPHLLLLRFLHFLPFHLLSHHPPLLHAPFHQFPLDPFTDLLSSFRKWDSRVGCDKFREKTNGVLLNHSKVVSLQEFGVGCGGFELNHVSVLVKEWTWIPDNLDNCILVVRMASVYHLHSSNCICIWYQRYYNPTQRVGSVSTDTDYSNSSPFFRIFSRSCINTSFRSRRSFHEHKSCPFGWLLKAVFHNVSAMEWLSFRLNLLSNFVSAFSLVLLVSLPEGFIINIAGLAVTYGNQNLNVLQASVIWNICNAENKMISVERILQYTNLASESPLVIENCRPPRNWPETGTISFQNLQIRYAEHLPSVLKNITCTFPGRKKIGVALDKCQLGHLVRAMDEKLTPQSLTEESSILVLDEATASVDSATDGVIQDIICQEFNIEQCHNSSSESTQL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1454 414 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 143 344 - -
Psa6g1454 414 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 367 400 - -
Psa6g1454 414 PANTHER - 143 344 - -
Psa6g1454 414 PANTHER - 367 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1454 Psa-Chr6 70210857 70214033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1454 56 147 Xyloglucan Fucosyltransferase1 AT1G71990 45.745 2.49e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1454 - K05665 gmx:100809749 238.039