Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1199 ATGGCTTCCTTATTATATAGAACTTTTGGCTATGAAGTTGCATCCTTTATAAGCGGTTTGTTTGCACATCCAACTCATCATAATAATCACAAACATAATAAGAAGTTCAACATGCCAAAGGGTCGACCCATTTCGTTACAGACAGTTGAGCTGAAAGTAAGGATGTGTTGTACAGGTTGCGAAAGAGTTGTTAAAAACGCCGTCTATAAGCTCAAAGGCATAGATTCCGTGAAAGTCGACTTAGAGATGGAAAGGGTAACCGTTATTGGATATGTTGAGAGGAACAAAGTTCTTAAGGCAATTAGAAGAGCCGGAAAAAGAGCTGAATTTTGGCCTTACCCAAATCCACCACTTTACTTCACATCAGCTAGTAATTACTTCAAAGATACAACCAATGAGTTTAAAGAAAGTTACAATTACTACAGACATGGTTACAATCTTCCAGATAGACATGGGACCATTCATGTCACTCAACGTGGTGATGACCAAGTTAGCAACATGTTTAATGATGATAATGTCCATGCTTGTTCTCTCATGTAA 540 0.3796 MASLLYRTFGYEVASFISGLFAHPTHHNNHKHNKKFNMPKGRPISLQTVELKVRMCCTGCERVVKNAVYKLKGIDSVKVDLEMERVTVIGYVERNKVLKAIRRAGKRAEFWPYPNPPLYFTSASNYFKDTTNEFKESYNYYRHGYNLPDRHGTIHVTQRGDDQVSNMFNDDNVHACSLM* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1199 179 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 25 179 IPR045181 GO:0046872
Psa6g1199 179 CDD HMA 50 109 IPR006121 GO:0046872
Psa6g1199 179 ProSiteProfiles Heavy-metal-associated domain profile. 55 110 IPR006121 GO:0046872
Psa6g1199 179 SUPERFAMILY HMA, heavy metal-associated domain 45 112 IPR036163 GO:0046872
Psa6g1199 179 Pfam Heavy-metal-associated domain 52 106 IPR006121 GO:0046872
Psa6g1199 179 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 44 25 179 - -
Psa6g1199 179 Gene3D - 37 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1199 Psa-Chr6 47895572 47897014 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1199 6 47895572 47897014 Psa6g1199 6 47895572 47897014 ECH