Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1020 ATGGATAATATTCTTGGTCTTCTCAAACTTCGCATCAAAAGAGGAATTGATCTTGCAATTCGTGATGCTAATTCCAGTGATCCTTATGTTGTTGTCCACATGGGTGACCAGAAGCTGAAGACTCGTGTAGTGAAAAACAATTGCAACCCTGAGTGGAATGAAGAATTAACCCTTTCAATAAGGGATATTAAAACTCCAATACGTCTCACGGTTTTTGACAAAGACACATTCTCCATAGATGACAAAATGGGTGATGCAGATGTAGACTTGAAACCATATGCTCAAGCTGTACAAATGAAGTTGACCACTCTTCCTGATGGTTGTGCAATCAAAAGGGTTCAAGCAAATAGGACTAATTGTCTTGCTGAAGAGAGTAGTTGTATTTGGAAAAATGGAAAGATAATCCAAGAAATGATTCTAAGATTGAGAAATGTTGAGAGTGGGGAATTGGTTGTGGAAATTGAATGGGTGGATATTCCTGGTAGCACAGGTTTATTAGGGGGAAAAAGTTAA 513 0.3821 MDNILGLLKLRIKRGIDLAIRDANSSDPYVVVHMGDQKLKTRVVKNNCNPEWNEELTLSIRDIKTPIRLTVFDKDTFSIDDKMGDADVDLKPYAQAVQMKLTTLPDGCAIKRVQANRTNCLAEESSCIWKNGKIIQEMILRLRNVESGELVVEIEWVDIPGSTGLLGGKS* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1020 170 CDD C2_ArfGAP 5 148 - -
Psa6g1020 170 Pfam C2 domain 7 93 IPR000008 -
Psa6g1020 170 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Psa6g1020 170 SMART C2_3c 7 102 IPR000008 -
Psa6g1020 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 162 IPR044562 -
Psa6g1020 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 91 IPR035892 -
Psa6g1020 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 162 - -
Psa6g1020 170 Gene3D C2 domain 3 163 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1020 Psa-Chr6 39385945 39387401 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1020 38 165 C2H2 Transcription Factor Family AT1G70790 66.923 6.72e-61 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1020 6 39385945 39387401 Psa6g1020 6 39385945 39387401 ECH