Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0443 ATGCTAAAAATACAATTCTATCTAGATGTTCTGCCGGAGAATGGACTTCTATTTTACAATGTGATAGCTTTAGAACTTCACTTCCTGCAGCAGCTGAAGTTAAATGCGTCTCAGGTGCCGGTTATTTTATCAATGCAAAAGCGGTCTCTGGAGCACAACACATTGAACAATTCTGCAGCCAAGTCGTTCAAACACATGCCTCAACAAAGAATTTGCCTTCGTCTTGCATCAAGACTTTCGCCTGTGCTGTGTTGCTGTTTGCAAAATGAGGTCGTATATATCAGTACACTTATCTTCATGAATGCTCACAAACAACAAGTTCCCATTTTTTGTCATCCAAAGCAAGCACCATTGGTTCACCTGCAACAAAACAATGTCAATGACTGCACTAAGGAATCCAATCGCTTGAATTTAAACTCAGAAGCATTCAGGAGGATTATTTCTTGTCAGATATCCGTTGGAAGAGAGGGTTCACCTGACGACTTGAACTTGGATGAACTGCGAGTGCTTTTCTACCCACACATAGAGTCTTTTGACCATTTGATTGATGCTGGGTTTGAAACCATATTCAGAAGCATCAACCTTAAATCCTTTGTGCTTCCTGCTAACTTCAAGAAGCTATTGCTCCAAAATTTGAAGAAGAATGTTGCTTCTGGAAAGCTTGTTAAGGTTAAAGCTTCATTCAAGCTCTCAGCAGCGGCCAAAAAGCCTGCAGTTGCCAAGCCAAAGACAAAGCCGGCTGCCAAGGCAAAGGCTGTGAAGGCCAAGACAGCCGCTAAGCCCAAATCTGCTGCTATCAAGCCCAAACCTGCTGCCAAGTCAAAGGCAGCTGTGAAACCAAAGTCCAAGGCAAAGCCTGCAAAGGTTGCAAAGACATCGACGAAGACGTCACCAGGAAAGAAAGTTGCTGCTGCTCATGCTGCTGTTAGAGTTGCAATATCAGAGACATGGCGAAGAAAGGCTATTTGGAACCGGGTGAAAGATTTTCATTTGCTTACGGGAATCCCTGTTACAAGTCACATTATTTCCCTAATAGTTGGCAGTGAAGACAAAGCACTGCAAGCAAGCCGGCATTTACTACAAGCTGGCTTCCATGAAACTCACACAAGACGTAGTCGATTGACTCGTGCTCGAGCGGCTGCTTTAAGTGCAACTGGACAGTTGCCACCATTGAAGAAGGTAGCAGAAGAAAGTCAGAAAAATCCTCTAAGAGCCAATTCAAAAAGAGCAGTTTCCGATGATACGTATCTTCCGCATGAGAAGAGGGCAATTCTTCATGATGTCACTAACATTCGCTGCGAGAACACTTATCGGAGCGGTTTAAATCCAACTGAAAATCAGGCTAAGAAAAGAAAGCTGACTAAACCCGCTCAACCCGATGACTCAAAACCGGTGAAATTATCAGAAATGCGGCTTAGATCATCAGAAGATGTCATGTGTTCTGTTAAGTTGGAAGACTTGAACCAATGCTGGGAGATACTTGTTGAACCAATACAAACGGTTATGCGAAGATACAGTGTTCCTGAGCCTTATGAGAATGGAAAGATTGCATATTGTATTGCCAACAACAAGGCTTTACCGCAGTCACGCTTGCAACAGCCAGGTTATTCAACAGCACTGCTCCTTCACCAGTTTGACTGGTTAACTAGAGAAGCGGTTCCGGTACTGAAGCCCGTAGAAAGCCAACATGGGAATTAG 1698 0.437 MLKIQFYLDVLPENGLLFYNVIALELHFLQQLKLNASQVPVILSMQKRSLEHNTLNNSAAKSFKHMPQQRICLRLASRLSPVLCCCLQNEVVYISTLIFMNAHKQQVPIFCHPKQAPLVHLQQNNVNDCTKESNRLNLNSEAFRRIISCQISVGREGSPDDLNLDELRVLFYPHIESFDHLIDAGFETIFRSINLKSFVLPANFKKLLLQNLKKNVASGKLVKVKASFKLSAAAKKPAVAKPKTKPAAKAKAVKAKTAAKPKSAAIKPKPAAKSKAAVKPKSKAKPAKVAKTSTKTSPGKKVAAAHAAVRVAISETWRRKAIWNRVKDFHLLTGIPVTSHIISLIVGSEDKALQASRHLLQAGFHETHTRRSRLTRARAAALSATGQLPPLKKVAEESQKNPLRANSKRAVSDDTYLPHEKRAILHDVTNIRCENTYRSGLNPTENQAKKRKLTKPAQPDDSKPVKLSEMRLRSSEDVMCSVKLEDLNQCWEILVEPIQTVMRRYSVPEPYENGKIAYCIANNKALPQSRLQQPGYSTALLLHQFDWLTREAVPVLKPVESQHGN* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0443 565 MobiDBLite consensus disorder prediction 274 288 - -
Psa6g0443 565 PANTHER HISTONE H1 199 308 - -
Psa6g0443 565 MobiDBLite consensus disorder prediction 438 466 - -
Psa6g0443 565 PANTHER LINKER HISTONE H1 AND H5 FAMILY PROTEIN 199 308 - -
Psa6g0443 565 MobiDBLite consensus disorder prediction 448 466 - -
Psa6g0443 565 Gene3D Aspartate Aminotransferase, domain 1 298 371 IPR015422 GO:0003824
Psa6g0443 565 Gene3D - 491 518 - -
Psa6g0443 565 MobiDBLite consensus disorder prediction 239 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0443 Psa-Chr6 14556983 14560359 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0443 374 439 Core Cell Cycle Gene Families AT1G80370 43.478 5.64e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0443 K00652 - gmx:100820189 112.079