Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0410 ATGATGCTTCCTCAAACAAATGATTCACAAGATACAACAATTATCAAACTTGAATCAGCATATTCTGATTTAGAATCACTTCTTCAATCATCAAAACAAATGGAACAAAACATCGAAACAATGGAAACAAGGTTTGATCTTTTACAAGGATCAATCACGACAGCGTCAAGAAGAATCAATCCTTTACAATCCTTATCCATGTCAAGAAAAGCACTTGATACAAGAATCAACAGAGCCATTTCCCCTGCTCTTGCTCTTCTCGAAACATTCAAACTCGCGGAATCGCTTCAAAACAATCTCCTTAACCTCTCTTCAAAGCTATCATCAGAAAACTCACATCAGAAGAGGCTTCAGAAGCTTCTAGATTACATGGATTGTGTTGATCAGTTGAATTTAGCTATAAACTCTATATGTCAAGTTGTTGAGCCGGTTATCATGAGGCTTCAAGAAGTGGTTGAGTTTATAAGTAGAACAAAAGCTGCTGATCAATACAGAACACAGAGGTTAAGAGAAGCACTTATAACTCTTAAAGCACTTTATGAAACTGAGGTTGATGAAATGAGATTTGAAGGGTTGTTGGATCAGGCTTTGCTTCATATGCAAGATGAGTTTGAGGCTCTTTTGCTTAAGTTAAAGCATAGGAAGTTGAGTGATTTTTCACACATGTCCCATGTTGGTGATGAGAGTGATGATGATTTCAAGGTTAACTTTGAGCTTGGATCTGAGTTGGAAATTGAAGTTTTGACAAGAATTTCAAACATTCTTGCTGCTAATGATTGCTTAGATATTTGCATTGACATCTATGTTAAGGTAAGATATAAAAGGGCTGCAAAAGCATTGATGAAGTTAAACCCTGATTACCTAAAAACATACACCCCAGAAGGAATTGATGAAATGGAATGGGAAAACTTAGAAACATCAATAACCCTTTGGACACAACATTTTGAAGTTGCAACAAAGAAAGTTCTTTTATCAGAAAAGAAACTTTGCGAAAGCGTTCTAGGCGAAATCATCGACGGGCTAATCCATCCAGAATGTTTTGTGAAAATATCGGACAAGATCATGGCCGTGTTCTTTCGTTTTGGAGAAGGCGTAGCCCGAAGCAACAAAGAGCCACAAAAACTGTTTAAACTATTAGACATGTTTGAATCATTGGAGAAGCTCAAACCACATGTACTCGAAATCTTCGATGGAGAATCCGGTGAGGATATCTGTGCGAGGTTTCGCGAGTTAGAGAAGCTAATCATTGATGCATCAAGCAAGGTTTTTTGGGAATTCGGGTTGCAAATAGAAGGAAACGTCGACGGGTTTCTTCCGCCTCCACAAGACGGTTCTGTTCCAAAAATAGTAAGATATGCTGTTAACTATCTTAAGTACTTATCCACAGAGAATTACAGAACAATAATGGCTAAGATTTTAAGAACAGAACAAACATGGAAAACCGAGTTGATGGTATCATCGAAACACGAAACGGATGAAGATTTATTGAAGTATGCTATTAGCAATGTAATGGAAGCACTTCAAAGAAACATAGAATCGAAACGTTTGAGTTCAAAAGACAAGATTTTGATGAATATTTTCATGATGAACACATATTGGTATATGTATATGAGAACAAAGAACACAGAACTTGGTGATTTGTTGGGTGAGAAATATATAAAAGAAAATTACAAAGCAGTGGCAGAAGAATCAGCTTACTTGTATCAGAAGCAAGCTTGGTTGGTTTTGGTGAAGATTTTGGATCATGATATTAATTTAGAGGAAAAAAGAAGTGGAAGGTTGGTGAATGAAAAGATTGAGACATTTTTCAAGTGTTTGAGTGAGATTTGTGAGAGGCATAGGAGTTTCTATAGTATACCTGATGTTGATTTGAGGGAACAAATGAGGGATGCAACTGTGAAACTTGTAGTGCCAATTTATGCTGAGTTTTTGGAGTCTTATTCCGGATTTTTGCAAAGGAAAGCTTATCCTAGTCCTCAAAGGATGCAAGGATTGCTTGGAAAAGCTTTTGGTTCTAACATTGATTGGAATTTGAATGGTGGTCGTAACTCTGGTTCGTTGGAAACTGATATCAGACGGTCTAGATGA 2088 0.3688 MMLPQTNDSQDTTIIKLESAYSDLESLLQSSKQMEQNIETMETRFDLLQGSITTASRRINPLQSLSMSRKALDTRINRAISPALALLETFKLAESLQNNLLNLSSKLSSENSHQKRLQKLLDYMDCVDQLNLAINSICQVVEPVIMRLQEVVEFISRTKAADQYRTQRLREALITLKALYETEVDEMRFEGLLDQALLHMQDEFEALLLKLKHRKLSDFSHMSHVGDESDDDFKVNFELGSELEIEVLTRISNILAANDCLDICIDIYVKVRYKRAAKALMKLNPDYLKTYTPEGIDEMEWENLETSITLWTQHFEVATKKVLLSEKKLCESVLGEIIDGLIHPECFVKISDKIMAVFFRFGEGVARSNKEPQKLFKLLDMFESLEKLKPHVLEIFDGESGEDICARFRELEKLIIDASSKVFWEFGLQIEGNVDGFLPPPQDGSVPKIVRYAVNYLKYLSTENYRTIMAKILRTEQTWKTELMVSSKHETDEDLLKYAISNVMEALQRNIESKRLSSKDKILMNIFMMNTYWYMYMRTKNTELGDLLGEKYIKENYKAVAEESAYLYQKQAWLVLVKILDHDINLEEKRSGRLVNEKIETFFKCLSEICERHRSFYSIPDVDLREQMRDATVKLVVPIYAEFLESYSGFLQRKAYPSPQRMQGLLGKAFGSNIDWNLNGGRNSGSLETDIRRSR* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0410 695 Pfam Exo70 exocyst complex subunit 311 653 IPR046364 GO:0000145|GO:0005546|GO:0006887
Psa6g0410 695 PANTHER EXOCYST COMPLEX PROTEIN EXO70 10 670 IPR004140 GO:0000145|GO:0006887
Psa6g0410 695 Gene3D Exocyst complex component Exo70 145 674 - -
Psa6g0410 695 PANTHER OS08G0519900 PROTEIN 10 670 - -
Psa6g0410 695 SUPERFAMILY Cullin repeat-like 167 654 IPR016159 -
Psa6g0410 695 Coils Coil 17 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0410 Psa-Chr6 13286066 13288507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0410 11 658 EXO70 exocyst subunit family AT4G31540 28.102 4.85e-71 243