Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0358 ATGCAGATTTTCAAGTCTCTTCAAATTATTCTGCTGCTCATATTCTGCAGCAGACAAACCGCAGCACAAACCAAAAACACATACATAATTCACATGGACAAATCCACCATGCCAGAAACATTCACCGATCACCTTAACTGGTTCGATACATCACTAAAATCAGTATCAGAAACAGCAGAGATTCTCTACACTTACAAACACATAGCTCATGGATTCTCCACAAGACTTACTCATCAAGAAGCTGAAACACTTTCAAACCAACCAGGAATTCTCTCTGTTATCCCTGAACTCAGATATCAACTTCACACAACAAGAACACCACAGTTCCTTGGTTTGCCACAAACCAACACTCTTTTACCTCAGTCTAAACAACAGAGCCAGGTGATTATTGGTATTCTTGACACTGGTATATGGCCAGAGACAAAAAGCTTAGATGACACAGGACTTGGTCCAATCCCAAGTAGCTGGAAAGGAGCATGTGAAACCGGTAACAACATGAATTCGTCAAACTGCAACAAAAAACTCATTGGCGCCAGGTTTTTCGCAAAAGGGTATGAGGCAGCACTTGGTCCTATAGATGAAACAACAGAATCGAGATCACCTAGAGATGATGATGGACATGGAACTCACACGTTAACAACAGCCGCTGGTTCTATTGTAGAAGAAGCTAGCTTATTTGGTTTAGCTTCTGGTACAGCAAGAGGCATGGCTACACAAGCTCGTGTAGCAGCTTACAAAGTGTGTTGGACTGGTGGTTGTTTCACTTCCGACATAGCTGCCGGAATGGATAAGGCTATCGAAGACGGTGTTAACATCTTATCAATGTCCATCGGTGGCAGCTTAACAGAATATTACAGAGACATCATTTCAATCGGTGCTTTCACAGCAATGTCTCATGGAATTCTAGTCTCATCATCAGCTGGAAACGGTGGACCAAGTGCCGAAAGTTTATCCAACGTAGCACCATGGATAACAACAGTCGGAGCAGGAACAATCGACCGCGATTTCCCTAGTTACATAACACTTGCAAACGGAAAAAACTACACAGGCGCATCACTTTACAATGGAAACCCGTTACCCGATTCATTCCTACCACTTGTTTATGCAGGAAATGCAAGTAATTCAGCAGTTGGGTATCTCTGCATACCGGATTCATTAACAAAATCAAAAGTTTTAGGCAAAATCGTGATATGCGAAAGAGGTGGAAACTCAAGAGCTGAAAAGGGTCTTGTAGTAAAAAATGCCGGTGGATTAGGAATGATTCTGGCAAACAATGAAGAGTATGGTGAAGAACTAATAGCAGATTCTCATCTTCTACCAGCAGCATCATTGGGTCTAAAATCAAGCAGTATCCTAAAAAACTACGTTTTCACTACGAAAAATCCTAAAGCTAAACTAGTTTTCGGTGGCACACACTTACAAGTTCAACCTTCTCCAGTGGTAGCAGCATTCAGTTCAAGAGGACCAAACTCTTTAACACCGAAGATTCACAAACCCGATTTAATAGCTCCGGGTGTAAACATCTTAGCCGGTTGGACCGGTTCAGTTGGTCCAACCGGTTTAACCACAGACAAAAGGCACGTGAACATTGCAACCGGGAAACCCGCTACTCCGTTCGATTTCGGATCCGGACACGTAGACCCTGTTTCCGCCCTTGATCCTGGACTTGTTTACGACATCAACGTCGATGATTATCTTGGATTTTTCTGTGCGCTAAACTACACGTCGTCGCAGATCAAAATCGCGGCGAGGAGAGATTTCGTTTGTGATAGAAAGAAAAATTATAGGGTTGAGGATTTCAACTATCCTTCTTTTGCGGTTGCTTTGGAAACAGCTTCGGGAATTGGCGGTGGTTCGGATAAACCGGTGACGGTGGAATACAGTAGGGTTCTTACGAATGTTGGAGGTCCGGGGATTTATAAAGCGTCTGTGGTGCTTTCGGCGGTGGATTCTTCGTCGGTGAAGGTTGTGGTGGTACCGGAGACGATTAAGTTTGGGGTTAATGAGAAAAAGGGTTATACGGTGCGTTTTACGTGCGGTTCGATGCCTTCTGGAACGAAGAGTTTTGGTTATTTGGTGTGGAGTGATGGGAAGCATAGGGTTTCGAGTCCAATTGTGTTTAGTTGGACTTGA 2133 0.436 MQIFKSLQIILLLIFCSRQTAAQTKNTYIIHMDKSTMPETFTDHLNWFDTSLKSVSETAEILYTYKHIAHGFSTRLTHQEAETLSNQPGILSVIPELRYQLHTTRTPQFLGLPQTNTLLPQSKQQSQVIIGILDTGIWPETKSLDDTGLGPIPSSWKGACETGNNMNSSNCNKKLIGARFFAKGYEAALGPIDETTESRSPRDDDGHGTHTLTTAAGSIVEEASLFGLASGTARGMATQARVAAYKVCWTGGCFTSDIAAGMDKAIEDGVNILSMSIGGSLTEYYRDIISIGAFTAMSHGILVSSSAGNGGPSAESLSNVAPWITTVGAGTIDRDFPSYITLANGKNYTGASLYNGNPLPDSFLPLVYAGNASNSAVGYLCIPDSLTKSKVLGKIVICERGGNSRAEKGLVVKNAGGLGMILANNEEYGEELIADSHLLPAASLGLKSSSILKNYVFTTKNPKAKLVFGGTHLQVQPSPVVAAFSSRGPNSLTPKIHKPDLIAPGVNILAGWTGSVGPTGLTTDKRHVNIATGKPATPFDFGSGHVDPVSALDPGLVYDINVDDYLGFFCALNYTSSQIKIAARRDFVCDRKKNYRVEDFNYPSFAVALETASGIGGGSDKPVTVEYSRVLTNVGGPGIYKASVVLSAVDSSSVKVVVVPETIKFGVNEKKGYTVRFTCGSMPSGTKSFGYLVWSDGKHRVSSPIVFSWT* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0358 710 Pfam Fibronectin type-III domain 599 706 IPR041469 -
Psa6g0358 710 CDD PA_subtilisin_like 339 466 - -
Psa6g0358 710 SUPERFAMILY PA domain 358 429 IPR046450 -
Psa6g0358 710 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 17 530 - -
Psa6g0358 710 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 534 708 - -
Psa6g0358 710 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 102 IPR037045 -
Psa6g0358 710 Pfam Subtilase family 126 527 IPR000209 GO:0006508|GO:0008236
Psa6g0358 710 CDD Peptidases_S8_3 99 332 IPR034197 -
Psa6g0358 710 SUPERFAMILY Subtilisin-like 101 556 IPR036852 GO:0004252|GO:0006508
Psa6g0358 710 Gene3D Peptidase S8/S53 domain 128 533 IPR036852 GO:0004252|GO:0006508
Psa6g0358 710 Gene3D - 333 474 - -
Psa6g0358 710 ProSiteProfiles Serine proteases, subtilase domain profile. 98 552 - -
Psa6g0358 710 Pfam PA domain 365 445 IPR003137 -
Psa6g0358 710 Gene3D - 569 709 - -
Psa6g0358 710 Pfam Peptidase inhibitor I9 27 102 IPR010259 -
Psa6g0358 710 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 530 IPR045051 -
Psa6g0358 710 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 534 708 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0358 Psa-Chr6 11097503 11100297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0358 9 710 Subtilisin-like Serine Gene Family AT5G67360 56.332 0.0 868