Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0350 ATGGGACAAGCAGCTTCCACTGCCGCCGTCGCCAACCGCCGGGAAAGAACCACCGCGAAAACCACCAGATCTACCTCTTTGGTTTCTCCGATGAACGCTACCGAAGAAGATGATGATGATATTAGACATCCGGTTGACCGTGGAATTTCTGATTATATATCAGATCTACCTGACGAGTGTTTAGCGATTGTGTTTCAGTCGTTGAGCCCAGCCGATCGGAATCAGTGTTCACTCGTTTGCCGGCGGTGGTTGATTGTTGAAGGACAGAGTCGGCAGCGTCTTTCGTTAAACGCGAAACTGGATCTGCTTCCGGTGATTTCGTCTCTCTTCAATCGATTTGATTCGGTGACGAAACTTGCTTTGAAATGCGATCGTAGATCCGTGAGTATAAGAGATGAAGCTCTCGTTATAATCTCCGAGCGTTGCCCTAATCTCACGCGCCTTAAGCTCCGCGCGTGTCGTGAGCTTACGGATGCTGGAATGGAAACTTTCGCGAGGAATTGTAAAGGATTGAAGAAATTATCGTGTGGATCTTGTACTTTTGGATCTAAAGGTATGAACGCGGTGCTGGATAATTGTGCTGCTCTTGAGGAATTGTCGGTGAAGCGGCTCCGGGGGATTGCGGAGACTGCGGTGGCGGAGCCGATTGGGCCGGGTGTAGCGGCGGCGTCGCTCAAGACGATTTGTTTGAAGGAGCTTTATAATGGACAGTGTTTTGGTTCGTTGATTCTTGGTGCGAAGAATCTGAAAACCTTGAAGCTTTTTCGATGCTCGGGTGATTGGGACACGCTTTTTACGCTTATGGCGGAGCGTGTCACGAGCATGATTGCTGATGTTCACTTTGAGAGGCTTCAGATTAGTGATATTGGATTACAAGCTATTTCACATTGTTCGAATTTGGAGATTTTGCATCTTGTTAAGACACCTGAGTGCACTGATTTGGGACTTGTTGCGATTGCGGAGCGGTGTAAGTTGTTAAGGAAGCTTCACATTGATGGATGGAAAGCGAATCGGATCGGTGACGAAGGGTTAATAGCGGTTGCTAAGTTTTGCCCTAATCTACAAGAGTTGGTGCTTATTGGTGTTAACCCTACAAAAGCAAGTTTGGAAATGTTGGCATCTAATTGCCCTAATCTAGAGAGGTTGGCTTTGTGTGCAAGTGATACTGTTGGTGATCCGGAGATATCATGCATTGCTGCAAAGTGTTTAGCTTTAAAGAAACTCTGCATTAAGAGCTGTCCTGTTTCTGATCATGGAATGGAAGCTTTGGCGAATGGGTGTCCCAATTTGGTGAAAGTGAAGGTTAAGAAATGTAAAGGCGTTACCCCTGAGGGTGGAGATTGGTTGAGGCTCACTCGGGGATCAGTTGCTGTTAATTTGGATACTGTCGAAGCGGAACTTCAAGATGCTAGTGCTAGTGATGGTGGAGCACAAGACAATGCTATAGAGTTTCCTCCAATGCCTGTCTGCGCAGCAGCATCTACATCGGGAAATATTGCATCAAGAAGTACTGTTCGATCGGCTTCGTTCAAGCAAAGGGATTTGATATGGGGAGAGGGAGGAGCATTGGACACCACTGCCTTTAAAACTCACTTCATCATATTGTTTTATACGGGAGAGGATCCCTTCCATTTGATACTTCCTTTTATTCATAATAGAATACTTATGGCTTAA 1674 0.4618 MGQAASTAAVANRRERTTAKTTRSTSLVSPMNATEEDDDDIRHPVDRGISDYISDLPDECLAIVFQSLSPADRNQCSLVCRRWLIVEGQSRQRLSLNAKLDLLPVISSLFNRFDSVTKLALKCDRRSVSIRDEALVIISERCPNLTRLKLRACRELTDAGMETFARNCKGLKKLSCGSCTFGSKGMNAVLDNCAALEELSVKRLRGIAETAVAEPIGPGVAAASLKTICLKELYNGQCFGSLILGAKNLKTLKLFRCSGDWDTLFTLMAERVTSMIADVHFERLQISDIGLQAISHCSNLEILHLVKTPECTDLGLVAIAERCKLLRKLHIDGWKANRIGDEGLIAVAKFCPNLQELVLIGVNPTKASLEMLASNCPNLERLALCASDTVGDPEISCIAAKCLALKKLCIKSCPVSDHGMEALANGCPNLVKVKVKKCKGVTPEGGDWLRLTRGSVAVNLDTVEAELQDASASDGGAQDNAIEFPPMPVCAAASTSGNIASRSTVRSASFKQRDLIWGEGGALDTTAFKTHFIILFYTGEDPFHLILPFIHNRILMA* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0350 557 Gene3D Ribonuclease Inhibitor 88 460 IPR032675 -
Psa6g0350 557 Pfam F-box domain 53 85 IPR001810 GO:0005515
Psa6g0350 557 Pfam Leucine Rich repeat 142 165 IPR001611 GO:0005515
Psa6g0350 557 PANTHER UNCHARACTERIZED 38 465 - -
Psa6g0350 557 Gene3D - 52 87 - -
Psa6g0350 557 SUPERFAMILY F-box domain 47 85 IPR036047 GO:0005515
Psa6g0350 557 MobiDBLite consensus disorder prediction 1 37 - -
Psa6g0350 557 MobiDBLite consensus disorder prediction 1 32 - -
Psa6g0350 557 PANTHER F-BOX PROTEIN SKIP2 38 465 - -
Psa6g0350 557 ProSiteProfiles F-box domain profile. 50 94 IPR001810 GO:0005515
Psa6g0350 557 SUPERFAMILY RNI-like 103 461 - -
Psa6g0350 557 SMART LRR_CC_2 168 192 IPR006553 -
Psa6g0350 557 SMART LRR_CC_2 323 350 IPR006553 -
Psa6g0350 557 SMART LRR_CC_2 427 454 IPR006553 -
Psa6g0350 557 SMART LRR_CC_2 402 426 IPR006553 -
Psa6g0350 557 SMART LRR_CC_2 351 375 IPR006553 -
Psa6g0350 557 SMART LRR_CC_2 376 401 IPR006553 -
Psa6g0350 557 SMART LRR_CC_2 297 322 IPR006553 -
Psa6g0350 557 SMART LRR_CC_2 142 167 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0350 Psa-Chr6 10866482 10869640 Dispersed