Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0340 ATGGAAGCTGGGGAAGATTGTTGTGTGAAAGTTGCGGTTCATGTTCGGCCATTAATCAATGATGAGAAGCTTCAAGGGTGTAAAGATTGTGTAACTGTTGTTTCTGGGAAGCCTCAGGTACAAATTGGGGCTCATTCCTTTACATTTGATCATGTTTATGGGAGCACTGGTTCTCCCTCATCTGCCATGTTTGATGAGTGTGTTGCTTCCCTTGTTGGAGGTCTGTTCCAAGGATATAATGCCACGGTTCTCGCATATGGTCAGACAGGTTCCGGGAAAACATACACAATGGGCACTGGCTCTAAAGATTATTATCAAACAGGAATAGTACCTCAAGTTATGAGTGCATTGTTTTGTAAAATCGAGACCTTAAAGCATCAGATTGAATTTCAGCTGCATGTTTCCTTTATCGAGATTCTTAAAGAAGAAGTAAGAGATTTGCTGGACCCATCCTCTATGAGCAAACCCGATACTGCAAATGGACATGCAGGGAAAGCGCCTATTCCTGGTAAAGCACCTATACAAATTCGTGAGGCTTCAAATGGCGTTATTACCTTAGCAGGATCTACCGAAGTTAGTGTTGCATCACTAAAAGAAATGTCTGCTTGCCTAGAACAAGGATCACTAAGTAGAGCGACTGGGAGCACAAATATGAACAACCAATCCAGTCGTTCACATGCCATCTTCACCATCACATTAGAGCAGATGCGGAAACTCAACAATCCTAGTGAGAACGGTTTAAACGATACAATGAATGAAGAGTATCTTTGTGCCAAGTTGCACTTAGTAGACCTTGCTGGATCAGAACGAGCTAAACGAACAGGGTCTGATGGTTTGCGTTTTAAAGAAGGAGTTCACATTAACAAAGGCCTACTAGCACTTGGCAATGTGATTAGTGCACTCGGTGATGAAAAAAAGAGAAAAGAAGGTGCTCATGTTCCTTATAGGGATAGTAAACTTACTAGGCTATTACAGGATTCACTCGGTGGTAACAGCAGAACTGTTATGATAGCTTGCATAAGTCCTGCTGATATCAATGCTGAGGAAACCCTTAACACTTTGAAGTACGCAAATCGTGCACGCAATATCCAAAATAAGCCTGTTGTCAATAGAGATCCAATGTCCAATGAGATGCTTAAAATGCGACAACAACTCGAGCATTTGCAAGCAGAACTTTGTACTCGTTCTGGTAGCTCTTCCGAGGAGGTTCAGGTCCTTAAAGAAAGAATTTCTTGGCTTGAAGCAGCTAATGAAGATCTTTGCCGTGAACTTCATGAATATCGTAGCAGATGCTCTGTTGTGGCACAAAGTGAAAAGGATGCTTATGATGGTAGCATGTGCAATGTAAAGACGGATGGGCTTAAAAGAGGCCTACCTATCACAACTCCTGATTATCCGATGAGTGAAACAACGGGGGATTCAAGAGAAATTGAAGAAGTAGCTAAAGAATGGGAGCATACACTTCTTCAAAATAGTATGGACCGAGAATTACACGAATTGAACAAACGCTTGGAGCAGAAAGAGTCTGAGATGAAGCTTTTTGGATCATCGGATGCTGAAACACTCAAGCAGCACTTTGGAAGGAAGATCGTGGAACTTGAGGATGAGAAGAGAACTGTCCAGCAAGATAGGGATCGTCTTTTGGCTGAAGTTGAAAATCTTGCCGCCGGTTCTGATGGACAAACACACAAATCAGATGATATCCATGCCCAAAAATTGAAAGCACTTGAAGCCCAGATTCTGGATCTGAAGAAGAAACAGGAGAGCCAGGTTCAGCTTCTAAAGCAAAAGCAAAAAAGTGATGAAGCAGCAAAGCGCCTGCAAGATGAAATACAATCTATAAAAGCCCAAAAGGTTCAATTGCAACAAAAGATAAAACAAGAGGCAGAACAGTTTCGGCAGTGGAAAGCCTCTAGAGAGAAAGAGCTTCTGCAATTAAGGAAGGAAGGAAGAAGAAATGAGTTTGAAAGGCATAAGCTGCAAGCTCTAAATCAGCGCCAGAAAATGGTCCTTCAGCGAAAGACTGAGGAAGCTGCAATGGCCACCAAGAGGTTAAAGGAATTGTTAGAAGCTCGTAAATCTTGCAGCCGAGACACTTCAGTCAACGGGAGTGGAACAAATAAACAGAGTAATGAAAAGTCCTTGCAACGGTGGCTTGATCACGAGCTAGAAGTCATGGTAAAAGAGCATGAAGTTCGTTTTGAGTATGAGAAGCAGAGCCAAGTGCGTGCTGCTCTTGGAGAGGAGTTAGCCATGCTGAAACAAGTAAATGAATTTGCTGCCAGTGGTCTCAGTCCTCCAAGGGGAAAGAACGGATTTGCTAGAGCGTTCTCAATGTCGCTGAATGCAAGAATGGCAAGAATAGCTTCACTGGAAAACATGCTGAACATATCATCTAATTCACTTGTGGCAATGGCTTCTCAACTATCTGAGGCGGAAGAACGAGATCGGGCCTTTAGTAACCGTGGACACTGGAATCAGTTGCGCTCAATGGGTGAAGCCAAGATTTTGCTTCAATATATGTTTAATTCTCTTGCAGACACTAGGTGTCAACTATGGGAGAAAGACATGGAGATAAAAGAAATGAAAGATCAAATCAGGGAACTTGTAGGTCTATTACGGCAAAGCGAGATCAAGAGAAAGGAAGTTGAGAAGGAACTAAAAGTGAGAGAGCAAGATGTTGCAACTACATTGGCCAAGCCAGCTTCGGGAAACCCACCAAATTCATTGAAACACTACGCCGAAGAAATCAAGGAACCTTTATCTCCTGAGTCTGTGCCAGCATCGAAACAACGCAAATATACGCCAGGAATTGCTAATGGTCAAACGAGGGAATCAGCAGCGTTTATAGATCAAAGCAGAAGGATGGTACCCATTGGGCAACTGTCGATGAAAAAGCTAGCAATTGCAGGACAAGCTTCTGGCAAGTTATGGAGGTGGAAAAGGAGCCATCATCAGTGGCTACTACAATTCAAATGGAAGTGGCAGAAACCATGGAGACTTTCTGAACGAATTCGACACAGCGATGAAACAATCATGAGATCAAAGCCACGTTCACAGACTTTGCCTCAGATTATGTGA 3081 0.4288 MEAGEDCCVKVAVHVRPLINDEKLQGCKDCVTVVSGKPQVQIGAHSFTFDHVYGSTGSPSSAMFDECVASLVGGLFQGYNATVLAYGQTGSGKTYTMGTGSKDYYQTGIVPQVMSALFCKIETLKHQIEFQLHVSFIEILKEEVRDLLDPSSMSKPDTANGHAGKAPIPGKAPIQIREASNGVITLAGSTEVSVASLKEMSACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNNPSENGLNDTMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGAHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDPMSNEMLKMRQQLEHLQAELCTRSGSSSEEVQVLKERISWLEAANEDLCRELHEYRSRCSVVAQSEKDAYDGSMCNVKTDGLKRGLPITTPDYPMSETTGDSREIEEVAKEWEHTLLQNSMDRELHELNKRLEQKESEMKLFGSSDAETLKQHFGRKIVELEDEKRTVQQDRDRLLAEVENLAAGSDGQTHKSDDIHAQKLKALEAQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQSIKAQKVQLQQKIKQEAEQFRQWKASREKELLQLRKEGRRNEFERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKSCSRDTSVNGSGTNKQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALGEELAMLKQVNEFAASGLSPPRGKNGFARAFSMSLNARMARIASLENMLNISSNSLVAMASQLSEAEERDRAFSNRGHWNQLRSMGEAKILLQYMFNSLADTRCQLWEKDMEIKEMKDQIRELVGLLRQSEIKRKEVEKELKVREQDVATTLAKPASGNPPNSLKHYAEEIKEPLSPESVPASKQRKYTPGIANGQTRESAAFIDQSRRMVPIGQLSMKKLAIAGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSERIRHSDETIMRSKPRSQTLPQIM* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0340 1026 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 394 IPR027417 -
Psa6g0340 1026 Coils Coil 573 638 - -
Psa6g0340 1026 Gene3D Kinesin motor domain 2 392 IPR036961 -
Psa6g0340 1026 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 2 1026 - -
Psa6g0340 1026 Coils Coil 403 423 - -
Psa6g0340 1026 Pfam Kinesin motor domain 15 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g0340 1026 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Psa6g0340 1026 MobiDBLite consensus disorder prediction 695 713 - -
Psa6g0340 1026 CDD KISc_KIF4 7 364 - -
Psa6g0340 1026 Coils Coil 530 550 - -
Psa6g0340 1026 MobiDBLite consensus disorder prediction 693 714 - -
Psa6g0340 1026 Coils Coil 490 510 - -
Psa6g0340 1026 Coils Coil 671 691 - -
Psa6g0340 1026 Coils Coil 859 893 - -
Psa6g0340 1026 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g0340 1026 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g0340 1026 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g0340 1026 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g0340 1026 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g0340 1026 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa6g0340 1026 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 2 1026 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0340 Psa-Chr6 10517146 10524980 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0340 9 389 Miscellaneous Gene Families AT5G06670 36.573 5.99e-54 199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0340 6 10517146 10524980 Psa5g0985 5 73910345 73923690 PCT