Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0295 ATGGACGGTTACGATGGAACCGTTAGGCTTGGAGCTATTAACATGAAGTATGATCGCGGTGACTTTGACTCCGGTGCCGACGTGTCGGTTTCTTCTCCGGTTACTAAACAGAAAGCCGCCGCCGCTAAGCAATTCATCGAGAATCATTACAAGAATTATCTTCAAGGATTGCAGGATCGCAAAGATAGACGTAGAGCGCTTCAAAGGAGAGTGCAGGAATCTCAATTACCAGTGGAAGAGCAGGAAGTGATGATGAGGAATTTGGAACGTAAAGAAACCGAGTACATGAGACTTCAAAGACGTAAAATTGGAATTGATGACTTTGAGCAATTAACAGTAATTGGTAAAGGTGCTTTCGGTGAGGTTAGGTTATGCCGTGGTAAAAGTTCTGGAGAGATTTTTGCCATGAAGAAATTGAAGAAGTCAGAGATGCTTAGCCGTGGGCAGGTGGAACATGTACGATCTGAGAGGAACTTGCTGGCAGAGGTTGATAGCCGATGCATAGTAAAACTCCATTATTCATTCCAAGATTCAGATTTCCTATATCTCATCATGGAATATTTACCTGGCGGCGACATTATGACACTGTTAATGAGAGAAGATATTCTTTCTGAAAATGTTGCTCGCTTCTACATTGCTGAAAGTATTCTTGCTATCCATTCAATACATCAACACAACTATGTACATAGGGATATAAAGCCAGATAACCTTATACTGGATAAAAATGGTCATTTGAAGCTTTCAGACTTCGGCTTATGTAAGACTCTTGATGACAAGTATTCAACAATTTTATTAGAAAATGAAGATTTTAACGGTCAAGAATCAACTAGTGAAACTGAAGGATATTTTGTCTCCCCTTGGTTGATGCCAAAGGAAAAATTACAGCAGTGGAAACGTAATCGCCGTGCATTGGCATATTCAACTGTTGGAACTCTTGACTACATGGCTCCTGAAGTTTTGCTCAAGAAGGGGTATGGAATAGAGTGTGATTGGTGGTCTCTTGGGGCAATCTTGTATGAGATGCTTGTTGGATATCCTCCATTTTGTTCTGATGATCCAAGGATGACCTGCCGGAAGATTGTGAATTGGAAAGCATGCCTGAAATTCCCCGAAGAACCCAAGATATCAGCTGAAGCTAAGGATCTCATCTGTAGCTTATTATGTGATGTTGACACGAGACTAGGAACGAGGGGAGTAGACGAAATAAAGGCTCATCCATGGTTCAAGGGTATTCAGTGGGACATGCTTTATGAATCGGAGGCTGCATATAAACCTACAGTCATTGGAGACTTGGACACACAAAACTTCGAGAAGTTTCCTGATGTAGGACCACCATCCGTAACTGAAACAATGGGACCTTGGAGAAAGATGTTGACATCCAAAGACACTAATTTCATAGGATACACTTATAAGAAATCAGACATCCTTAAATCAATTGGAGCTACAGATGAAGATATCAGAGTAAATGGATCATCAAAATCACCCTCTTTGATTTCTTTGTTAGGGCAAATGGATTTGCAAGATGTCGTCATTACAGAAAATGAACAGAAGCCAGAAACTTGA 1563 0.4082 MDGYDGTVRLGAINMKYDRGDFDSGADVSVSSPVTKQKAAAAKQFIENHYKNYLQGLQDRKDRRRALQRRVQESQLPVEEQEVMMRNLERKETEYMRLQRRKIGIDDFEQLTVIGKGAFGEVRLCRGKSSGEIFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLHYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSENVARFYIAESILAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKTLDDKYSTILLENEDFNGQESTSETEGYFVSPWLMPKEKLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGIECDWWSLGAILYEMLVGYPPFCSDDPRMTCRKIVNWKACLKFPEEPKISAEAKDLICSLLCDVDTRLGTRGVDEIKAHPWFKGIQWDMLYESEAAYKPTVIGDLDTQNFEKFPDVGPPSVTETMGPWRKMLTSKDTNFIGYTYKKSDILKSIGATDEDIRVNGSSKSPSLISLLGQMDLQDVVITENEQKPET* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0295 520 Coils Coil 78 101 - -
Psa6g0295 520 Gene3D Phosphorylase Kinase; domain 1 427 437 - -
Psa6g0295 520 SUPERFAMILY Protein kinase-like (PK-like) 83 457 IPR011009 -
Psa6g0295 520 Pfam Protein kinase domain 108 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0295 520 CDD STKc_NDR_like 106 471 - -
Psa6g0295 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Psa6g0295 520 Gene3D Phosphorylase Kinase; domain 1 78 191 - -
Psa6g0295 520 Gene3D Transferase(Phosphotransferase) domain 1 307 426 - -
Psa6g0295 520 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Psa6g0295 520 SMART serkin_6 108 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0295 520 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 507 - -
Psa6g0295 520 Gene3D Transferase(Phosphotransferase) domain 1 192 259 - -
Psa6g0295 520 Pfam Protein kinase C terminal domain 429 470 IPR017892 GO:0004674|GO:0005524|GO:0006468
Psa6g0295 520 SMART pkinase_C_6 409 472 IPR000961 GO:0004674|GO:0005524|GO:0006468
Psa6g0295 520 ProSiteProfiles Protein kinase domain profile. 108 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa6g0295 520 ProSiteProfiles AGC-kinase C-terminal domain profile. 409 480 IPR000961 GO:0004674|GO:0005524|GO:0006468
Psa6g0295 520 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 6 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0295 Psa-Chr6 8866253 8874479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0295 1 508 AGC Kinase Gene Family AT5G09890 76.953 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Psa6g0295 Pkinase 1.9e-64 CL0016