Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0289 ATGCAAGCTTGGGGGAGGTTAGGAGGTTATATAAGACGCGGTGTGTGCAATGTTTCGGGGCCGTTTCTTCCGTTCGGCGGTGCTGTTGATATTATCGTTGTTCAGCAGAAAGATGGTAGCTTTAAATCTTCTCCTTGGTATGTTAGGTTTGGGAAATTTCATAGGGTTATGAAGGCGGCGAAGAGGGAAAAGGTTAAGGTTAGTGTTAGTGTTAATGGGGTTGAAACTGATTTTCATATGTGTTTGAGTCCTAAAGGGGAAGCTTTTTTTCTTCATGGGAATTTGCAACATGGTGAAGGAGAAGAAGAAGAGCAAGAGGGACAAGATGAGGAAGAAGATGGGATAGGATCTATGTGGTGTTATGATGATATTCAAGTGAGTGGTAGTAATAAGAGGCAATTTAAGTCCAAAAGTTGTAACTTTCGTTCGGAGGTTCCGGTTGTAGATAGGACTAGTTCTCGCCGTTCAAGAATGTGTAGGCTTGTATTTGGGCCGAGTTCTGATGGTGGTGATGGTGAAGATGCGGATGCGGATTTAGTGGAGCGCGCTGAAATTGCAGCCAAGTTGTTGGATTTAAGGTGGTCTACAAATATCACTTTTGATGAACTTCCCTATCGGGAAAGAAAGAAGACTCAAGGTGATAAGTTGGACAAGGAGAGAGGCAAGACTGAAGAATCTGGTGAGGTTCTTCGCCTTGCAAGTGAAGTATGTGGAGAAGTTCATGTCCATGATAAGGTTTTGCACACTACAACTCTTCAGCTACCTGAGGGTGGAAAAGCTGACGGAGTTACTAGGAGTGTCCATCTCGAGAGGCCGGTAACAGATTGTGGCATTTGTGATGTTGCGGATGTTGGAAGCAGGGCAAAGTTTCAAAAATCTCAGACTGTCAATATTGGTCGAAGGGATCGTTCTGTTAAGAAGGTTAGCGTAAATACTCCAACGTCTGAACAACTGTCATCCTTGAATCTGAAGGAAGGGAGGAACACAATAACCTTCTGTTTCTCTACACCTATGATGGGGATGCGGCAGATTGATGCTCGAATATTTTTGTGGAAATGGAATACTCGCATAGTGATATCAGATGTGGATGGGACAATTACAAGGTCAGATGTTCTAGGTCAATTCATGCCTTTAGTTGGGATTGACTGGTCACAGACTGGTGTTGCTCATTTATTTTCTGATATCAAGGAGAATGGCTACCAGTTGCTTTTTCTCAGTGCTCGTGCAATTTCTCAAGCACATAACACCAGACAATTCCTATTCAACCTTAACCAGGACGGGAAAGTCTTACCAGATGGTCCAGTTGTTATTTCCCCCGACGGACTTTTTCCTTCTTTATATAGAGAAGTTATCCTCAGGGCTCCGCACGAGTTCAAAATTGCATGTTTAGAGGACATCAGGGCACTTTTTCCTCCTGATTGCAATCCGTTCTATGCTGGTTTTGGAAATAGAGATACTGATGAAATCAGCTACCTTAAGGTTGGAATCCCTAAAGGAAAAATATTCATTATTAATCCCAAGGGTGAGGTTTCTATAAACCGACGGTATTTAGACACAAATTCATACACTTCTCTTCACACTCTCGTGAATGGAATGTTTCCCCCTACAAACTCATCTGAACAGGTCTTTTCTCTCTCTCCCTCCCTCCCTCTCTCTCTCTGA 1662 0.4308 MQAWGRLGGYIRRGVCNVSGPFLPFGGAVDIIVVQQKDGSFKSSPWYVRFGKFHRVMKAAKREKVKVSVSVNGVETDFHMCLSPKGEAFFLHGNLQHGEGEEEEQEGQDEEEDGIGSMWCYDDIQVSGSNKRQFKSKSCNFRSEVPVVDRTSSRRSRMCRLVFGPSSDGGDGEDADADLVERAEIAAKLLDLRWSTNITFDELPYRERKKTQGDKLDKERGKTEESGEVLRLASEVCGEVHVHDKVLHTTTLQLPEGGKADGVTRSVHLERPVTDCGICDVADVGSRAKFQKSQTVNIGRRDRSVKKVSVNTPTSEQLSSLNLKEGRNTITFCFSTPMMGMRQIDARIFLWKWNTRIVISDVDGTITRSDVLGQFMPLVGIDWSQTGVAHLFSDIKENGYQLLFLSARAISQAHNTRQFLFNLNQDGKVLPDGPVVISPDGLFPSLYREVILRAPHEFKIACLEDIRALFPPDCNPFYAGFGNRDTDEISYLKVGIPKGKIFIINPKGEVSINRRYLDTNSYTSLHTLVNGMFPPTNSSEQVFSLSPSLPLSL* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0289 553 Pfam LNS2 (Lipin/Ned1/Smp2) 312 534 IPR013209 -
Psa6g0289 553 SMART lns2 357 513 IPR031315 -
Psa6g0289 553 PANTHER LIPIN 1 227 IPR026058 -
Psa6g0289 553 PANTHER LIPIN 291 541 IPR026058 -
Psa6g0289 553 SUPERFAMILY HAD-like 350 499 IPR036412 -
Psa6g0289 553 PANTHER GH19076P 1 227 - -
Psa6g0289 553 PANTHER GH19076P 291 541 - -
Psa6g0289 553 Pfam lipin, N-terminal conserved region 25 94 IPR007651 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0289 Psa-Chr6 8748409 8754293 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0289 6 8748409 8754293 Psa5g1021 5 77701693 77711274 PCT