Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0267 ATGGCACTGAACGATTTCTTCGCCGCCGGCGAGATAGCGACGGAGCTTCTCAAAATGCTCATAACCATATCTCGAGAGCCTCTTCTATGCAGAGCAAGCGCAGAACTCAAATCTTGCATCAACGAAATCCTCCCCACAATACAAGAAATCAAATACACCGGCGTCAAGTTACCGGAGCATAGACAGTTTCAGCTCGACCGTTTCTCGGAGATTCTCCGTTCAGGCGTCGAACTCTCTCAAAAAGTCCTCTCCTCAAGCCGGTGGAACGTGTACAAGAATCTCCAGCTAGCAAAGAAAATGGATAAGCTTGAGAAGAACGTTTCACGGTTCGTGCAAGGTCCCATGAAGGCTCATATATTGGCTGACGTGCATCACGTGCGGTTCGAGATGGCGGACCGGTTCGACCGCGTGGACGCGTCGAATAGGAAGCTGGAGAAGTATTTTGGTGCCATGAAGATTGGTGTTGGAGGTGGAGGGTGGGTGGAGGAAGCTGTGAGGTCATGTATGGAGGAAGATGAGAATTGGGTTGAGGAGGTTTGTAGAGATGAACAAGTTAAATGTTATTTTAAGGAGAGAATCTTGTTTCTAACTGTTTCACAATCTCCAAATGTGGAGCAGCTAAGGACAAAGATTTGGGGACACATCATGGGAAACAGAAACTTGAATCCAGATTATGCGGTTCCTCAATGGATACCACAATTTGAATGCAGAAGTGAAGCTAGAACGTTGGTTGTTCTAGACGATGTTTGGTCACTCTCAGTTCTTGAACAGCTTGTGTATAGAATACCAGGTTGCAAGTTTGTTGTGGTTTCTAGGTTCAAATTTCCAACAATATTCAATGAAACTTATGAGGTTGAATTGTTGAGTGAAGAGGATGCTTTGTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCGATTCCTTTTACAGCTAATGAGAATTTGGTTAAACAGGTTGTGAGTGAGTGCGAAAAGCTTCCATTGGCGCTAAAAGTGATCGGAGCTTCGTTGAGAGATCAAACCGAAATGTTTTGGGAAAGTGTTAAAAACAGGTTATCTCAAGGCCAAAGTATTGGAGAATCTCATGAAATCAACCTGATTGAAAGAATGGCGATAAGTATAAACTACTTAAGAGAAGAGATCAAGGAATGTTTCTTGGACTTGTGTTCATTCCCCGAGGATAAAAAAATCCCTCTAGATGTTCTCATCAATATGTGGGTCGAAATCCATGATATTGATGAGAAAGATGCTTTTGCTATTGTTGTTGAGCTCTCTAACAAAAATCTTCTCACCTTGGTGAAAGAAGCACGTGCTGGTGGCATGTATAGTAGTTGCTTTGAGATCTCAGTTACTCAACATGATGTACTTAGAGACCTTGCACTTAATTTGAGTAACCGCGAGACCATTAATGAACGCCGGCGATTAGTTATGCCAAAACGAGAGAACGGGCTCCCCAGAGAATGGATGAGACGCAAACACAAACCATTCGAGGCACAAATTGTTTCAATTCACACAGGCGAAATGAAGGAAATGGATTGGCCTAAACTTGAATTTCCAAAAGCTGAAGTGCTGATTATAAATTTTACATCCAAGAATTACTTTTTACCTCCTTTCATAGATAAAATGCCAAATTTAAGAGCATTAATAGTAATAAACTATAGTGCATCCTATGCTTGTCTTCACAATGTTTCAGTTTTCAACAATTTGGCAAACTTGAGAAGCCTATGGCTTGAAAAAGTTTCCATCCCTCAATTTGGAGGCATTGTCATGGAAAACTTAGGCAAGTTATTTATAGTCTTGTGTAAGATTAACAACAATCTAGAGGGTAAAGAGGTAAACCTGTCTCGAATCTTTCCTAACCTCTCTGAGATCACTCTTGATCATTGTGATGATGTAACTTCTTTGCCCTCAAGCATTTGTAGGATACAATCTCTCAAAAACATGAGTCTCACCAATTGCCACAATTTGGCACAACTTCCTGCTGAATTAGGCGCCCTGAGATCTCTCGAGATTCTTCGGTTATACGCTTGTCCGAAATTGAAAATGCTTCCTCCTAGCGTCTGCGACATGATTAGATTGAAGTATATCGATGTTTCGCAATGTGTTTACTTGTCATGTTTTCCTGAAGAGATTGGAAAATTAGCAAGTTTGGAAAAGATTGACATGAGGGAATGCTGCATGATTAAGAATGTGCCTCAATCTGCTATTTTGTTGAAGTCTTTGAGGCTTGTAATTTGTGATGAGGAAGTGTTTGGTATGTGGAAAGATGTTGAGAAGGCCAAGCCTAATGTTCATGTTCAAGTGTCAGAACAGTACTTTGATTTGGAATGGCTTAGAGAATGA 2343 0.4119 MALNDFFAAGEIATELLKMLITISREPLLCRASAELKSCINEILPTIQEIKYTGVKLPEHRQFQLDRFSEILRSGVELSQKVLSSSRWNVYKNLQLAKKMDKLEKNVSRFVQGPMKAHILADVHHVRFEMADRFDRVDASNRKLEKYFGAMKIGVGGGGWVEEAVRSCMEEDENWVEEVCRDEQVKCYFKERILFLTVSQSPNVEQLRTKIWGHIMGNRNLNPDYAVPQWIPQFECRSEARTLVVLDDVWSLSVLEQLVYRIPGCKFVVVSRFKFPTIFNETYEVELLSEEDALSLFCHHAFGQKSIPFTANENLVKQVVSECEKLPLALKVIGASLRDQTEMFWESVKNRLSQGQSIGESHEINLIERMAISINYLREEIKECFLDLCSFPEDKKIPLDVLINMWVEIHDIDEKDAFAIVVELSNKNLLTLVKEARAGGMYSSCFEISVTQHDVLRDLALNLSNRETINERRRLVMPKRENGLPREWMRRKHKPFEAQIVSIHTGEMKEMDWPKLEFPKAEVLIINFTSKNYFLPPFIDKMPNLRALIVINYSASYACLHNVSVFNNLANLRSLWLEKVSIPQFGGIVMENLGKLFIVLCKINNNLEGKEVNLSRIFPNLSEITLDHCDDVTSLPSSICRIQSLKNMSLTNCHNLAQLPAELGALRSLEILRLYACPKLKMLPPSVCDMIRLKYIDVSQCVYLSCFPEEIGKLASLEKIDMRECCMIKNVPQSAILLKSLRLVICDEEVFGMWKDVEKAKPNVHVQVSEQYFDLEWLRE* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0267 780 Gene3D Ribonuclease Inhibitor 481 761 IPR032675 -
Psa6g0267 780 Gene3D - 175 277 IPR027417 -
Psa6g0267 780 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 180 777 - -
Psa6g0267 780 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 8 170 - -
Psa6g0267 780 Gene3D - 370 459 IPR036388 -
Psa6g0267 780 SUPERFAMILY L domain-like 517 743 - -
Psa6g0267 780 Pfam NB-ARC domain 178 367 IPR002182 GO:0043531
Psa6g0267 780 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 388 IPR027417 -
Psa6g0267 780 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 10 133 IPR008808 -
Psa6g0267 780 PRINTS Disease resistance protein signature 236 250 - -
Psa6g0267 780 PRINTS Disease resistance protein signature 323 337 - -
Psa6g0267 780 PRINTS Disease resistance protein signature 640 656 - -
Psa6g0267 780 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Psa6g0267 780 Gene3D - 287 369 IPR042197 -
Psa6g0267 780 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 180 777 IPR044974 GO:0006952
Psa6g0267 780 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 170 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0267 Psa-Chr6 8096694 8100825 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0267 554 757 Receptor kinase-like Gene Family AT5G27060 27.488 3.69e-09 58.5