Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0207 ATGTCGTTGTCTTCAGTCCACGCTCGTCTCACACTCCTCGCTCTCTTATCCGCCACAACCTTTTATTGCTTCTACAAATCTCGCCGCTTAAGAAACCTCAAGTTAACAACACTCTCTCTAAACCCTAACCCTAACCCTAACCCTAAGATCCTCTTCCTTTCCGAAACCGGCACTTCCAAATCCCTCGCTAACCGTCTCCATCGTTTTCTCGCTCTAAACGACGTCGCAGTTGACCTTATCGATGGAAGAAACTACGAGCCGGAAGATCTTCCCAAAGAAGCGCTCATTCTCATCGTTGCTTCCACCTGGGAAGACGGAAAACCATCGCCTGCTTATAGATTCTTCGCGGATTGGCTCGCTGAGAGTTCCGAAGACTTTAGAGTTGGTTCTTTGCTGCTCTCGAGGTGTAGGTTTGCGGTTTTTGGTGTAGGTAGCGGAGCTTACGGGGAAAATTTCAATGCCGTTGGTAAGGATCTCGGTAAACGGTTGAAAGCACTGGGGGCTGCTGAGTTGATTCCGTTGTGGGAAGGGGATGTTGATGGTGGTGACTTGGATGGGGTTTTTGATCAGTGGTGTGGGAAGGTGGTTGGGTTGTTGAAAGGGGACAGTGATGTTGTTCGTGGTGATTTGGAGAACGGGGATGCGGAATGTGGTGTTTTGAGTTCTGATGAAGAGGAATCTGATGAGGAGGAAGAGGCGGAGTCGGAGATTGTTGATCTTGAAGACATTGCTGGTAAAGCTCCTTCGAGGAAGTCGGTCGCAACAGTGAAGGAGACTAATGGGAAGTTGAATGGCAAGAAACAAATGGTGACTCCTGTGATTAGAGCAAATTTGGTGAAGCAGGGATATAAGATTATTGGTTCGCATAGTGGTGTCAAGATTTGTAGATGGACCAAGTCACAACTTCGAGGTCGAGGTGGTTGCTACAAGCATTCATTTTATGGAATTGAGAGTCACAGGTGCATGGAGGCAACCCCTAGCTTGGCATGTGCAAATAAATGTGTTTTCTGCTGGAGGCATCACACAAATCCAGTAGCAAAAAGTTGGCAGTGGGAGATGGACGATCCATTAGAGATCGTAAATTCCGCAATAGAGCAGCATACAAATATGATTAAACAAATGAAAGGAGTTCCTGGAGTCACGTTGGAGCGATTAAATGAAGGCTTCACACCACGGCATTGTGCATTATCTCTTGTTGGTGAACCTATTATGTATCCAGAGATAAATGCACTTGTGGATGAGTTGCACAAAAGGAGAATTTCCACTTTTCTAGTTACAAATGCACAATTTCCAGAGAAAATTAAGGCGTTGAGGCCTATCACCCAGTTATATGTCAGTGTTGATGCTGGAACAAAGGACTCTCTTAAGGCAATCGATAGACCGCTCTTTGGAGATTTTTGGGAAAGATTTATTGATTCCTTGACTTCTCTTAAAGAAAAACATCAGCGTACTGTGTACCGCCTGACCCTTGTGAAAGGATGGAATGCTGAAGAAGTTGATGCTTACTATAATCTCTTTAGCTTAGGAGAACCCGACTTCATTGAGATCAAGGGTGTTACATATTGTGGCTCGACTGCTACATCAAAATTGACAATGGAGAATGTCCCTTGGCATGCCGACGTGAGAGCTTTCTCAGAGGCTCTGGCTCTGAAAAGCCAAGGGGAGTATGAAGTTGCATGTGAGCATGTTCACTCGTGCTGCGTCCTCTTAGCAAAAACTAAGAAGTTCAAAATTGATGGCCAGTGGTATACATGGATAGACTATGAGAAATTTCATGATCTGGTGGCTTCTGGAAGTACTTTTGATAGCAAAGATTATATGGCTGCCACACCATCCTGGGCCGTCTATGGAGCTGAGGAAGGCGGGTTTGATCCAGCACAATTGAGATATAGGAAAGAGAGACATCACAAGTCGACCCGCAAAGAATCAGGTTAA 1935 0.4537 MSLSSVHARLTLLALLSATTFYCFYKSRRLRNLKLTTLSLNPNPNPNPKILFLSETGTSKSLANRLHRFLALNDVAVDLIDGRNYEPEDLPKEALILIVASTWEDGKPSPAYRFFADWLAESSEDFRVGSLLLSRCRFAVFGVGSGAYGENFNAVGKDLGKRLKALGAAELIPLWEGDVDGGDLDGVFDQWCGKVVGLLKGDSDVVRGDLENGDAECGVLSSDEEESDEEEEAESEIVDLEDIAGKAPSRKSVATVKETNGKLNGKKQMVTPVIRANLVKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVAKSWQWEMDDPLEIVNSAIEQHTNMIKQMKGVPGVTLERLNEGFTPRHCALSLVGEPIMYPEINALVDELHKRRISTFLVTNAQFPEKIKALRPITQLYVSVDAGTKDSLKAIDRPLFGDFWERFIDSLTSLKEKHQRTVYRLTLVKGWNAEEVDAYYNLFSLGEPDFIEIKGVTYCGSTATSKLTMENVPWHADVRAFSEALALKSQGEYEVACEHVHSCCVLLAKTKKFKIDGQWYTWIDYEKFHDLVASGSTFDSKDYMAATPSWAVYGAEEGGFDPAQLRYRKERHHKSTRKESG* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0207 644 Pfam Flavodoxin 50 191 IPR008254 GO:0010181
Psa6g0207 644 PRINTS Flavodoxin signature 49 62 IPR001094 GO:0010181
Psa6g0207 644 PRINTS Flavodoxin signature 97 108 IPR001094 GO:0010181
Psa6g0207 644 PRINTS Flavodoxin signature 135 145 IPR001094 GO:0010181
Psa6g0207 644 PRINTS Flavodoxin signature 160 179 IPR001094 GO:0010181
Psa6g0207 644 ProSiteProfiles Radical SAM core domain profile. 314 557 IPR007197 GO:0003824|GO:0051536
Psa6g0207 644 Coils Coil 223 243 - -
Psa6g0207 644 Gene3D - 23 208 IPR029039 -
Psa6g0207 644 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 1 638 IPR034556 GO:0008033|GO:0051539
Psa6g0207 644 MobiDBLite consensus disorder prediction 218 236 - -
Psa6g0207 644 Pfam Radical SAM superfamily 326 505 IPR007197 GO:0003824|GO:0051536
Psa6g0207 644 SUPERFAMILY Radical SAM enzymes 327 523 - -
Psa6g0207 644 Pfam Wyosine base formation 509 572 IPR013917 -
Psa6g0207 644 CDD Radical_SAM 326 526 - -
Psa6g0207 644 Gene3D Aldolase class I 251 584 IPR013785 -
Psa6g0207 644 MobiDBLite consensus disorder prediction 217 236 - -
Psa6g0207 644 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 1 638 - -
Psa6g0207 644 SUPERFAMILY Flavoproteins 47 200 IPR029039 -
Psa6g0207 644 SFLD tRNA wybutosine-synthesizing 265 576 IPR034556 GO:0008033|GO:0051539
Psa6g0207 644 SFLD tRNA wybutosine-synthesizing 265 576 - -
Psa6g0207 644 ProSiteProfiles Flavodoxin-like domain profile. 48 196 IPR008254 GO:0010181