Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0145 ATGTTAGCTGATCTAGCACGACATGGTGATGAAGTTCTTGTTGCGAGGGGTGGACAAGGAGGGATTAGCTTGTTAGATATGCCAAAACATAATAGGAAAAAAACTACGAGTTTGACAACAAACATGATGAGAGATGACTCGGATAAGGTTTTAGTTCACGGTCAACCTGGGGAGGAAGTTAAGTTGGAGTTGACCCTACGAGTTGTAGCTGACGTTGGTTTGGTTGGACTTCCAAATGCTGGGAAATCAACGCTTCTGGGAGCCATTACCCTTGCAAAACCCGATATTGCTGATTATCCTTTTACAACATTAATGCCAAATCTTGGGCGCCTTGATGGTGATCCCAACTTGGGAGCAGGAATGTATTCATCTGAAGCCACATTGGCAGATTTGCCTGGTCTTATTGAAGGTGCTCACTTGGGAAAGGGTCTTGGTCGCAATTTTTTGAGACACCTAAGAAGAACACGTCTATTGGTCCATGTTGTTGATGCATCTACTGAAAACCCTGTAAATGACTACAGAACTGTCAGAGAAGAGTTGCGCATGTATAATCCTGAGTACCTCGAACGACCATACATTGTCGTTTTGAATAAGATTGACCTTCCAGAGGTTGAGGACAAGCTTCCAATATTGACTCAAGAAATTCTAAGAATTGGCAGTGATGGTACAGCTTCTCAACAAAAACCAACTTCTGAAATTCCTGCTCAATTATTGTCTGATGAAAGTGACACAAAGGAAAAAAAACTTGAGGACTATCCACGACCTCACTCTGTTATTGGAGTTAGTGTTCTAAAGCGTATCAGGGTTAAGGAGATGTTAAAGGAGATAAGGGCTGCTTTAAGGCATTGCATTGATTCCAATGGAGCATTGGCTTCCACTGTCACGCGGTGA 891 0.4265 MLADLARHGDEVLVARGGQGGISLLDMPKHNRKKTTSLTTNMMRDDSDKVLVHGQPGEEVKLELTLRVVADVGLVGLPNAGKSTLLGAITLAKPDIADYPFTTLMPNLGRLDGDPNLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDASTENPVNDYRTVREELRMYNPEYLERPYIVVLNKIDLPEVEDKLPILTQEILRIGSDGTASQQKPTSEIPAQLLSDESDTKEKKLEDYPRPHSVIGVSVLKRIRVKEMLKEIRAALRHCIDSNGALASTVTR* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0145 296 Gene3D - 69 286 IPR027417 -
Psa6g0145 296 ProSiteProfiles Obg domain profile. 1 69 IPR006169 -
Psa6g0145 296 TIGRFAM small_GTP: small GTP-binding protein domain 71 206 IPR005225 GO:0005525
Psa6g0145 296 Pfam 50S ribosome-binding GTPase 71 198 IPR006073 GO:0005525
Psa6g0145 296 MobiDBLite consensus disorder prediction 221 251 - -
Psa6g0145 296 CDD Obg 70 215 IPR031167 GO:0005525
Psa6g0145 296 Gene3D GTP1/OBG domain 1 68 IPR036726 -
Psa6g0145 296 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 280 IPR027417 -
Psa6g0145 296 PANTHER GTP-BINDING PROTEIN OBGC2-RELATED 1 289 - -
Psa6g0145 296 MobiDBLite consensus disorder prediction 221 238 - -
Psa6g0145 296 ProSitePatterns GTP1/OBG family signature. 130 143 IPR006074 GO:0005525
Psa6g0145 296 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 1 289 IPR045086 GO:0003924|GO:0005525
Psa6g0145 296 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 70 281 IPR031167 GO:0005525
Psa6g0145 296 PRINTS GTP1/OBG GTP-binding protein family signature 72 92 IPR006073 GO:0005525
Psa6g0145 296 PRINTS GTP1/OBG GTP-binding protein family signature 93 111 IPR006073 GO:0005525
Psa6g0145 296 PRINTS GTP1/OBG GTP-binding protein family signature 128 143 IPR006073 GO:0005525
Psa6g0145 296 PRINTS GTP1/OBG GTP-binding protein family signature 145 163 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0145 Psa-Chr6 4396394 4400006 Dispersed