Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0110 ATGCACACACTATTTAAACCCATGAGCCAGTATAACACTAGAAAACATATCTTGTCACTTCATCTCAATTACAATTTCGACACAACAATGACCACCACCACCACTACCCCCACGTGTCTCCTCTTCTTCCTTCTTCCACTTCTCATAACCACCATCATATCTCCGGTAGCCACCGCCGGTAAAGGACAATGGCAGCTACTACAAAAAAACATTGGCATTGTAGCCATGCACATGCAACTCCTTCACAACGACCGGCTAATCATATACGACCGGACTGACTTCGGTCTCTCTAACCTTTCTCTACCCGATGGGAAATGTCGTAACGACCCGACAGAAACCGCCGTTAAAATCGATTGCACGGCGCATTCCGTCGAATACAACGTCTTATCCAACACTTTCCGTCCGTTGTTTGTACAAACCGATGTTTGGTGTTCTTCCGGCGGGGTGAACTCCTCTGGAACACTTGTCCAAACAGGCGGTTTCAATGACGGAGATCACGCCGTTCGAACCTTTGAACCTTGTAACAACTGTGATTGGCGGGAAATCGCCGGCGGACTTACTGCTCGGAGATGGTATGCTACTAATCAAAAACTGCCGGACGGCCGTCAGATTATCATCGGCGGTAGAAAACAATTTAACTATGAATTCTACCCCAAAAATGACATTAGTGCAGTAAATTTATATAGTTTACCATTTTTGGTTCAAACGAATGACCGTGGTGCAGAGAATAATTTGTACCCTTTTGTTTTTCTCAATGTTGATGGCCACCTCTTCATCTTTGCTAACAACAGAGCCATCCTCTTCGATTATAATAAGAATCTAGTGGTGAAGACATTTCCACAAGTACCAGGTGGAGAACCTAGGAGTTATCCAAGCACAGGTTCTAGTGTTTTGTTACCATTAAAAAATCTTCAATCAAGAACAATAGAAGCTGAGGTTTTGGTTTGTGGTGGAGCACCAAAAGGATCCTATCAAAGAGCAGAAGCAAAAGAATTTTTCGGAGCTTTGAATACTTGTGCCCGAATCAAAATAACCGACCCGAATCCGAATTGGGTAGTTGAAACCATGCCAGAAGGTAGAGTCATGAGTGATATGGTAATGCTTCCAAACGGTGACGTTTTGATAATTAACGGAGCGGGTTCAGGGACAGCCGGTTGGGAGCTCGGAAGAGAACCGGTTTTAAACCCGGTTCTTTATAAAACAAAAAACCCATCCGGTTCACGGTTCGAGTCACAAAACCCGTCTAATACACCACGAATGTATCATTCTACTGCTGTTTTGGTTCGTGATGGAAGGGTTATTGTTGGTGGTAGTAACCCTCATATTGGTTATAGTTTTGCTAATGTTTTGTTTCCAACTGAACTTAGTCTTGAAGCTTTTTCACCTTCTTATCTTGAACCGGGTTTCGCGAATGTTCGTCCGAGGATTTTGTCTTCTATTTTAGGGTCACTAAAGTATGGTCAAAAGTTGAAGTTGAAGTTTCAGGTGAAAGCAATGTTGGATCAGAATCTGGTTTATGCTACAATGTTGGCGCCGTCTTTTAATACGCATTCGTTTTCGATGAATCAGAGGTTGTTGGTGTTGGAGTCAAATAAAGTGGTTAAGGTGGAAGGAACAAGTTTTGAAATTGAGGTTACTGTGCCTGGTTCACCTGTTCATGCACCTCCTGGTTTTTATATGTTCTTTGTGGTTCATAGAGAGATTCCTAGTGAAGGTGTTTGGGTACATTTAGTTTGA 1737 0.4283 MHTLFKPMSQYNTRKHILSLHLNYNFDTTMTTTTTTPTCLLFFLLPLLITTIISPVATAGKGQWQLLQKNIGIVAMHMQLLHNDRLIIYDRTDFGLSNLSLPDGKCRNDPTETAVKIDCTAHSVEYNVLSNTFRPLFVQTDVWCSSGGVNSSGTLVQTGGFNDGDHAVRTFEPCNNCDWREIAGGLTARRWYATNQKLPDGRQIIIGGRKQFNYEFYPKNDISAVNLYSLPFLVQTNDRGAENNLYPFVFLNVDGHLFIFANNRAILFDYNKNLVVKTFPQVPGGEPRSYPSTGSSVLLPLKNLQSRTIEAEVLVCGGAPKGSYQRAEAKEFFGALNTCARIKITDPNPNWVVETMPEGRVMSDMVMLPNGDVLIINGAGSGTAGWELGREPVLNPVLYKTKNPSGSRFESQNPSNTPRMYHSTAVLVRDGRVIVGGSNPHIGYSFANVLFPTELSLEAFSPSYLEPGFANVRPRILSSILGSLKYGQKLKLKFQVKAMLDQNLVYATMLAPSFNTHSFSMNQRLLVLESNKVVKVEGTSFEIEVTVPGSPVHAPPGFYMFFVVHREIPSEGVWVHLV* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0110 578 SUPERFAMILY E set domains 470 577 IPR014756 -
Psa6g0110 578 Gene3D Immunoglobulins 472 578 IPR013783 -
Psa6g0110 578 SUPERFAMILY Galactose oxidase, central domain 124 466 IPR011043 -
Psa6g0110 578 CDD E_set_GO_C 468 577 IPR015202 -
Psa6g0110 578 PANTHER SECRETED PROTEIN-RELATED 55 577 - -
Psa6g0110 578 Pfam Galactose oxidase-like, Early set domain 473 576 IPR015202 -
Psa6g0110 578 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 55 577 - -
Psa6g0110 578 Gene3D - 58 468 IPR037293 -
Psa6g0110 578 Pfam Glyoxal oxidase N-terminus 76 318 IPR009880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0110 Psa-Chr6 3437722 3440443 Dispersed