Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0073 ATGGCTCTCCTCACTAATCCCTCTGAACAATCTCACTCCAAAAAAACACTCCCAAAACAAAAACACAAAACCCAACAACAACAACAACTGAATCAAAAGCAAAAACAAAAACAGAAACAAAAACAAAAACAAAAGCCACCATCTTCATGGGACCAAATCAAAAACATCCTAACTTGCAAACAGATCGAAGGCTCCACCGTTCACGATCCTTCAAAACCAAACAACAGTTACTCAAAACTAGGTTCATCTTGTAGCTCAATTTGTAGCTTCAGAGATGCCGTTCATGGAAACACTCGAGTTGTTCATAGGTCTGATAATTCATCCCCAGAAAGTAGCATCTTAGGTCAAGAAACAAGTTTACTCAAAAGAAAACCTGTCACTACCACTGCTTCATCGTCATCATCATCAAGAACTCGCTCTTCTGCATCATGTTCTGGGAAATCCAACGGTGGAAATAACTACACGTCATCATCTTCCAGAGGAATGCAGTTTAGAAAACTCTCTGGATGTTATGAATGTCACATGATCGTTGACCCTAGCAGGTTAGCAATTCCTAGGAGCACAGTGTGTGCTTGTGATCAATGTGGAGAGGTTTTCCCTAAGATTGAAAGCTTGCAGCTTCATCAAGCTGTTCGTCATGCTGTTTCAGAGCTGGGTCCGGAAGATTCGGGTCGGAACATAGTGGAAATAATATTCAAGTCAAGCTGGTTGAAGAGGGAGAGTCCAATGTGTAAGATCGAACGGATATTAAAAGTTCACAACACTCAACGAACAATCCAACGGTTCGAGGAATGCAGAGACGCAGTAAAATCCCGTGCAACCGCAACTACAAAGAAAAACCCCCGGTGTGCCGCAGACGGCAACGAACTCCTTCGTTTCCACAGCACAACCTTATCCTGCGCACTAGGCGCACGTGGATCCTCCGCCTTGTGCGCCACCGTACCTGGTTGCGGAGTGTGCACGATCATCCGGCACGGTTTTCAGAACAAAGGAGGTGTGAAAACCAACGCTAGCAGTGGTAAGGCCCACGACAATTCCATTGAAAGGATTGGAGAAGATTCTAGAAGAGCGATGCTGGTGTGCCGTGTGATTGCCGGAAAAGTGAAGCGCGTGGCGGAGGAAGGTGCGCCACCGATAACGGAGGAGGAAACGATGTCGTTTGATTCTGTTGCGGGGGACGCGGGAATCTACTCGAATCTCGAGGATTTAACAGTTTTCAATCCAAGGGCTATCCTTCCTTGTTTCGTGGTAATCTACAAGGTGCTTCCATGCTGA 1275 0.458 MALLTNPSEQSHSKKTLPKQKHKTQQQQQLNQKQKQKQKQKQKQKPPSSWDQIKNILTCKQIEGSTVHDPSKPNNSYSKLGSSCSSICSFRDAVHGNTRVVHRSDNSSPESSILGQETSLLKRKPVTTTASSSSSSRTRSSASCSGKSNGGNNYTSSSSRGMQFRKLSGCYECHMIVDPSRLAIPRSTVCACDQCGEVFPKIESLQLHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKRESPMCKIERILKVHNTQRTIQRFEECRDAVKSRATATTKKNPRCAADGNELLRFHSTTLSCALGARGSSALCATVPGCGVCTIIRHGFQNKGGVKTNASSGKAHDNSIERIGEDSRRAMLVCRVIAGKVKRVAEEGAPPITEEETMSFDSVAGDAGIYSNLEDLTVFNPRAILPCFVVIYKVLPC* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0073 424 Gene3D - 214 421 - -
Psa6g0073 424 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 33 422 - -
Psa6g0073 424 Coils Coil 23 43 - -
Psa6g0073 424 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 33 422 - -
Psa6g0073 424 MobiDBLite consensus disorder prediction 100 158 - -
Psa6g0073 424 ProSitePatterns Zinc finger C2H2 type domain signature. 190 213 IPR013087 -
Psa6g0073 424 MobiDBLite consensus disorder prediction 1 53 - -
Psa6g0073 424 SUPERFAMILY ADP-ribosylation 215 420 - -
Psa6g0073 424 ProSiteProfiles Zinc finger C2H2 type domain profile. 190 218 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0073 Psa-Chr6 2127888 2131510 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Psa6g0073 None None None