Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0071 ATGTCTGTTTCTGTTACCGTCACCTCCGCCGTGGGACCCTTTCTTCCCCGATCCCGCCGGCGGTCAACGACGGCCCTCCGATCCAGCAAGGTTTCAATTGAACAAAAGAGATTATTAACGAAGCTGAAACAAGAGTGTGCCACTCCTCTCCCCCTTCTTCAGCACGTGGCCGATACCATGTCTTCTGAAATGCGGGCCGGGCTTTCCTCCGTAGACGGGTCCGGGCTTCCCATGATACCTACTTATGTCCACACTCTTCCCACCGGAAATGAGAAAGGGTTGTTTTATGCATTGGATCTTGGTGGAACAAACTTTCGTGTCTTGAGAGTAGAGTTAGGTGGCAAAGATGATCGTGTTATTTCCACTCACTTTGAACAAGTTTCTATACCTCATGACCTCATGATCGCTACATCCGAGGAACTGTTTGACTTCATTGCTTTGGGGCTAGCTAAGTTTGTAGCGAAAGAGGATGGTAAATTTCATTTTCCACCAGGAAGGAAGAGAGAGATTGGATTCACATTTTCATTTCCTGTGAAACAAACATCTATTGATTCTGGCATACTAATCAAATGGACTAAGGGTTTTGCTGTCTCTGGAACTGTAGGAAGAGATGTGGTTGTTTGTTTGAATGAGGCTATGGAAAGACAACGACTAGATATGCGAGTTTCTGCTCTGGTTAATGATACTGTTGGCACACTAGCCGGAGCAGAATACTATGATAATGATGTTAAGGTTGCTGTTATTTTGGGTACTGGAACCAATGCTTGTTATGTCGAGCAGATAAGTTCCATTCCGAAATTACAAGGCCATGTTTCTTCTTCTGGTAAAATGATCATTAGTACTGAGTGGGGGGCTTTCTCAAATGGTCTACCTTTAACCGTGTTTGATAGAGAAATGGATGCTGCTAGCATCAATCCCGGTCAGCAGATCTTTGAGAAGACAATCTCAGGAATGTATCTAGGAGAAATTGCGAGACGAGTGCTACTCAATATGGCTCAAGAGGATGATTTGTTTGGAAGTTCTGTCTCTCAAAAACTGTCTACGCCGTTCATACTCGGGACTCCCGATCTATGCGCCATGCATCAGGATGATTCTGGCGATTTACAAATTGTCGGGTCCCTCCTCTATGATAAAGCAGGGGTTGAATCCAATCTAACTGAAAGAAAAGCAGTTCTAGAGGTTTGCGACACGATTGTAAAGCGAGGCGGTAGCTTAGCTGGGGCAGGAATTGTAGGAATTCTGCAAAAAATGGAAGAGGACTCAAAAGGTGATATCTTTGGAAAGAGAAGCGTTGTTGCCATTGATGGGGGTCTGTATGAAAATTATCCTCAATATAGGACTTACTTGCAAGATTCAGTAAAGGAGCTGTTAGGGACAGAAAAATCAAACAATGTGGTGATAGAACATTCAAAAGATGGTTCTGGTATTGGAGGTGCTCTATTGGCAGCTTCAAATTCAATGTACAAACAAGATTGA 1476 0.4383 MSVSVTVTSAVGPFLPRSRRRSTTALRSSKVSIEQKRLLTKLKQECATPLPLLQHVADTMSSEMRAGLSSVDGSGLPMIPTYVHTLPTGNEKGLFYALDLGGTNFRVLRVELGGKDDRVISTHFEQVSIPHDLMIATSEELFDFIALGLAKFVAKEDGKFHFPPGRKREIGFTFSFPVKQTSIDSGILIKWTKGFAVSGTVGRDVVVCLNEAMERQRLDMRVSALVNDTVGTLAGAEYYDNDVKVAVILGTGTNACYVEQISSIPKLQGHVSSSGKMIISTEWGAFSNGLPLTVFDREMDAASINPGQQIFEKTISGMYLGEIARRVLLNMAQEDDLFGSSVSQKLSTPFILGTPDLCAMHQDDSGDLQIVGSLLYDKAGVESNLTERKAVLEVCDTIVKRGGSLAGAGIVGILQKMEEDSKGDIFGKRSVVAIDGGLYENYPQYRTYLQDSVKELLGTEKSNNVVIEHSKDGSGIGGALLAASNSMYKQD* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0071 491 PRINTS Hexokinase family signature 96 112 - -
Psa6g0071 491 PRINTS Hexokinase family signature 170 195 - -
Psa6g0071 491 PRINTS Hexokinase family signature 222 238 - -
Psa6g0071 491 PRINTS Hexokinase family signature 245 259 - -
Psa6g0071 491 PRINTS Hexokinase family signature 309 331 - -
Psa6g0071 491 PRINTS Hexokinase family signature 391 413 - -
Psa6g0071 491 PRINTS Hexokinase family signature 468 484 - -
Psa6g0071 491 PANTHER HEXOKINASE 20 488 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Psa6g0071 491 Pfam Hexokinase 40 238 IPR022672 GO:0005524|GO:0005975|GO:0016773
Psa6g0071 491 ProSiteProfiles Hexokinase domain profile. 33 483 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Psa6g0071 491 SUPERFAMILY Actin-like ATPase domain 33 240 IPR043129 -
Psa6g0071 491 SUPERFAMILY Actin-like ATPase domain 242 486 IPR043129 -
Psa6g0071 491 Gene3D - 81 482 - -
Psa6g0071 491 ProSitePatterns Hexokinase domain signature. 170 195 IPR019807 GO:0004396|GO:0005524|GO:0006096
Psa6g0071 491 PANTHER HEXOKINASE-LIKE 1 PROTEIN-RELATED 20 488 - -
Psa6g0071 491 CDD NBD_sugar-kinase_HSP70_actin 97 259 - -
Psa6g0071 491 Pfam Hexokinase 244 483 IPR022673 GO:0005524|GO:0005975|GO:0016773
Psa6g0071 491 Gene3D - 59 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0071 Psa-Chr6 2050629 2053284 Dispersed