Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0036 ATGGTTATCACTACTAAATCTTCCTCTAATAACCACCCTCCGATAATCGCGCCGTCATCGTCGGCGCCGCCGGAGGATGAGGTTGTTATCCCTAATTTCACGCCGAAAACCCTTCCTTCGCCGTGGGCTCAGGTTGTTCGCGGCGGCGAGGTGGAATCGCCTACCGGCATTCATCAATCTCTGCCTTCGTCATCGTCGTCTTCCTCGTCCTCTTTGACTACTGGTGCTTCCGATCAAGCGCCGTCTTCTGATCATTCGTCAAAGGAGATATCTACTCCGCAGCAGTCAAAGGAAGTTTCTGCTCCGCAGCCGCCGGTGGTCGAGAACTCCGTTAAGACAGTAGATACCTCCGATGGTAGTGATGGCAATGCAGGTCGTTCTAAGAAGCCTGCATGGAACAAGCCCTCTAACGGAGTCGTCATCGAGACTGGTCCTGTCATGGGTGCTGAATCCTGGCCTGCCCTTTCTGAATCCGCCAAAATTTCTGCTAAATCGATAGCTGAATCGGCCTCCAAAGTTGCTTCTGCTGAAGGATCAACTTCCACTTCTCAGGCGCCTGTAATTTCACACCCTCCTCAGAGACATGGTACTAGTAACCCTAGACCTGGTTCAGCTACAAACAGTAATATGCCCAATAGGCTAAGACCTATTAGGCCAGTGGGTGGCATCAACATTGGGCACGGTCCTTCTCATACTCAGAGTAGCTTATCCAACCCTCCTACTCCTCCACCATTGCCTCCCTTTCCTGTATATCAGCTCCCTCCAGTTAACTTTCGGAATATGGGGCCAAGTATCCCTGACTCTTCTCCAAGAGATCATCACCGAAACAATACCTGGGATGCAAGACCATTGGTAGGGGGTTCCCCTCGCAGGGGTAGTTTTGGGACTCGTACACGGGGAGATGGTTCCTATCATCATAATAATTATAGTAACAGACGTGATCAAGATCGGGGAAATTATGTGAATACTAGAGATGCTCATGTATCCCAACCAAGGATGCCTCCGAGAGGAATATTGAGGCACCCACCACCACCACCTAGTACTGCTGCATTTCTGGGTCCTCAGCCCATTGCACCCTTTCCAAACCCTGTTGCTTATCCTGATGTGTATTACTTTCCAGCAGTCCCGTTGGATCCCTTTAGGGGCATGCCATTCTTTCCCCCCAGCCCTTCTCCTGCAACAGTCTACCCTGCTGCAGAATCTTCTTTCTCCAATGTGATAGTCAACCAGATTGATTATTACTTTAGTGATACTAATTTGGTGAAAGATGAGTTTTTAAAGCAAAATATGGATGAAGAGGGTTGGGTTTCAATAACCGTGATAGCAAACTTCCCTCGGGTTAAAAGTTTGACAAGCAACGTTCAGTTGCTTCTGGATTCAATGAAAAACTCAACTGTTGTGGACGTCAAGGGTGACAAATTGAGAAGACGTTATGACTGGATGAAATGGTTGTCCTCTTCTCAGGTTCAAGTTGATTCTGGTTCAGTTTCACCTAGTGAATCGAGCTACAATAACCTCGCTGCTGATTTGCAAACAATCAATCTGGAAACAACTAAAGCTGAAGGTGAGTCTCAACACTCTAATGGTGGCGATGATGCTGGGAACACCAATTAA 1614 0.4796 MVITTKSSSNNHPPIIAPSSSAPPEDEVVIPNFTPKTLPSPWAQVVRGGEVESPTGIHQSLPSSSSSSSSSLTTGASDQAPSSDHSSKEISTPQQSKEVSAPQPPVVENSVKTVDTSDGSDGNAGRSKKPAWNKPSNGVVIETGPVMGAESWPALSESAKISAKSIAESASKVASAEGSTSTSQAPVISHPPQRHGTSNPRPGSATNSNMPNRLRPIRPVGGINIGHGPSHTQSSLSNPPTPPPLPPFPVYQLPPVNFRNMGPSIPDSSPRDHHRNNTWDARPLVGGSPRRGSFGTRTRGDGSYHHNNYSNRRDQDRGNYVNTRDAHVSQPRMPPRGILRHPPPPPSTAAFLGPQPIAPFPNPVAYPDVYYFPAVPLDPFRGMPFFPPSPSPATVYPAAESSFSNVIVNQIDYYFSDTNLVKDEFLKQNMDEEGWVSITVIANFPRVKSLTSNVQLLLDSMKNSTVVDVKGDKLRRRYDWMKWLSSSQVQVDSGSVSPSESSYNNLAADLQTINLETTKAEGESQHSNGGDDAGNTN* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0036 537 Pfam La domain 407 462 IPR006630 -
Psa6g0036 537 MobiDBLite consensus disorder prediction 152 247 - -
Psa6g0036 537 MobiDBLite consensus disorder prediction 1 16 - -
Psa6g0036 537 MobiDBLite consensus disorder prediction 1 139 - -
Psa6g0036 537 MobiDBLite consensus disorder prediction 518 537 - -
Psa6g0036 537 CDD LAM 407 477 - -
Psa6g0036 537 PANTHER LUPUS LA PROTEIN-RELATED 62 526 IPR045180 -
Psa6g0036 537 SUPERFAMILY "Winged helix" DNA-binding domain 397 484 IPR036390 -
Psa6g0036 537 PANTHER LA-RELATED PROTEIN 1B 62 526 - -
Psa6g0036 537 Gene3D - 396 488 IPR036388 -
Psa6g0036 537 ProSiteProfiles La-type HTH domain profile. 397 486 IPR006630 -
Psa6g0036 537 MobiDBLite consensus disorder prediction 266 318 - -
Psa6g0036 537 SMART la 401 477 IPR006630 -
Psa6g0036 537 MobiDBLite consensus disorder prediction 162 213 - -
Psa6g0036 537 MobiDBLite consensus disorder prediction 56 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0036 Psa-Chr6 1294056 1300946 Dispersed/Transposed