Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa6g0028 | ATGTTGGATGCAGTTCTTCTGGCGCTATTCTTGCCGTGTCTCGGCATGGCCGCCATCTTCCTAGTCTACATATGTCTTCTCTGGTACGCCACTACTCACTCCACTACCGGAATCATTATCAAACCGGTCACCAATACCGGTCTTTCCCCTTCTGAACTCCAAAAGCTACCTACTATCACCGGTAAAGATCTCGTCGCTGGTCCTGAATGCGCCGTCTGTCTCGACGACATAAGCGAGGAACAATCAGCACGTGTGATTCCAGGTTGTAACCACGCTTTCCATTTGGAATGTGCTGACACGTGGCTTTCGAAACATCCTCTGTGTCCTGTTTGTAGAGCTAAACTCGATCCTAAACTCTTTGCCGATTCTTCTCAAAATCCATGTTAA | 387 | 0.4806 | MLDAVLLALFLPCLGMAAIFLVYICLLWYATTHSTTGIIIKPVTNTGLSPSELQKLPTITGKDLVAGPECAVCLDDISEEQSARVIPGCNHAFHLECADTWLSKHPLCPVCRAKLDPKLFADSSQNPC* | 129 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa6g0028 | 128 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 38 | 118 | IPR013083 | - | |
| Psa6g0028 | 128 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL23 | 1 | 128 | - | - | |
| Psa6g0028 | 128 | Pfam | Ring finger domain | 69 | 112 | IPR001841 | - | |
| Psa6g0028 | 128 | ProSiteProfiles | Zinc finger RING-type profile. | 70 | 112 | IPR001841 | - | |
| Psa6g0028 | 128 | SUPERFAMILY | RING/U-box | 59 | 118 | - | - | |
| Psa6g0028 | 128 | SMART | ring_2 | 70 | 111 | IPR001841 | - | |
| Psa6g0028 | 128 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 1 | 128 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa6g0028 | Psa-Chr6 | 1104985 | 1106491 | Transposed |