Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6628 ATGGGTGAAATTGAAGAAATTGGAGCTGATGGCTCGGATTTAGATGTTGATGATGTTAGGTATCACAATATACCGGAGAAAGATGTCAGTGATGAGGAGATTGAGGCGGAAGAATTGGAGAAGCGGATGTGGAAGGATCGCATCAAACTCAAAAGGATTAAAGAAAAGCAAAAGCTTGCAGCGCTGCAAGCTGCGGAGAAGCAAAAGCCGAGGCAGTCGTCGGATCAAGCTCGTAGGAAGAAAATGTCGAGGGCTCAAGATGGGATTCTCAAGTATATGCTGAAGCTTATGGAAGTCTGCAAAGCTCGTGGGTTTGTGTATGGAATCATTCCTGAGAAGGGGAAGCCGGTTAGTGGTTCCTCTGATAACATTAGAGCCTGGTGGAAGGAAAAGGTGAAGTTCGATAGAAACGGTCCTGCTGCTATAGTCAAGTATGAAGCGGAGTGTCTTGCTATGAGTGAGGCTGAAAATAACCGAAACGGGAACTCTCAGAGCATGCTGCAAGATCTACAAGATGCGACGCTTGGGTCACTGTTATCTTCTTTGATGCAACATTGTGATCCTCCTCAGAGGAAATTCCCGTTGGAAAAGGGTGTTCCTCCGCCGTGGTGGCCGACTGGGAATGAAGATTGGTGGTCGCATTTGAATTTACCTCATGGTCAGAGTCCTCCTTATAAAAAGCCACACGATTTGAAGAAGATGTGGAAAGTCGGAGTGCTAACCGCTGTTATAAAGCACATGTCACCTGATATCGCAAAAATACGAAGACACGTCCGTCAATCAAAATGCCTGCAAGACAAGATGACAGCAAAGGAGAGTTCGATTTGGCTAGGGGTATTAAGTCGGGAAGAAGCTCACATCAGACAGCCTAGTATTGATAATGGTATTTCTGGAATAACCGAAACGCTACCTGTTGGTCTTCCTATTGAGAATAAGCAACCTGCTGCTAGTAGTGCTAGCAACTATGATGTCGAGGGTATTGATGATAACGTCGGTTCTGTTTCTTCTAAAGAAGACAGGTGCGCTCATTGTATGGATACCGAGAAATCGGATAACTCGCGAAGGAATTCTGTCCAAGATACTGATCAAGTTAAGAAACAATCTAGGACAAAAAGACCCCGTTCGAGGTCAAGCGCAGCCGACAAATTACCAGCACAGTCTGACAATGAAATTTTGCAAATTGAACCTAGAAGCAAAGTGCCGAATATGAACGGGACAGAGGAAGCACGTGCTGTTGGACTCCATATGCATGGAAATGAACATGTCAATGGGACAGATTCTGTTTTGAGACTGACCGAGAAAGGACACGAGGTGCCAGCTCAACCACCGCCACCCGAGTTCATCAATCATTACTCTTATATGCATGCAAACAACATAGTTTCCTCGGAAAGTGTGTATATGAATAGACGGGCACCATTGCACTATGCTCCGTTGCAGAACCCTGACATGTCTCATGAAGCTACCTATAATCTCTACAATCCAGTTGCCGGATATGATCCTAATCACATTCAGGATGGGCAGCATCTGCAGCAGCCTGATCCCGCTCACATTGAACCAATTGGGCCACCAGAGAACGCTGCAATCTCTATACCTGCCGAAAATACCAAAGGCGATGAAATTCCCGGTGACATAAATTATTTCGGTAAAGACGCATTCCAAAACGAGCTCGATAGGCCTATTGATCCTTTCTTTGGATCTCCAATCAGCAACCTGTCATTTGATTTTGGAGGACTTAACAGTCCACCATTCCATATAGATGATTTCATAGGTGATGATGAAATGATTCAGTACTTCGGAGCATAG 1803 0.4504 MGEIEEIGADGSDLDVDDVRYHNIPEKDVSDEEIEAEELEKRMWKDRIKLKRIKEKQKLAALQAAEKQKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDRNGPAAIVKYEAECLAMSEAENNRNGNSQSMLQDLQDATLGSLLSSLMQHCDPPQRKFPLEKGVPPPWWPTGNEDWWSHLNLPHGQSPPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESSIWLGVLSREEAHIRQPSIDNGISGITETLPVGLPIENKQPAASSASNYDVEGIDDNVGSVSSKEDRCAHCMDTEKSDNSRRNSVQDTDQVKKQSRTKRPRSRSSAADKLPAQSDNEILQIEPRSKVPNMNGTEEARAVGLHMHGNEHVNGTDSVLRLTEKGHEVPAQPPPPEFINHYSYMHANNIVSSESVYMNRRAPLHYAPLQNPDMSHEATYNLYNPVAGYDPNHIQDGQHLQQPDPAHIEPIGPPENAAISIPAENTKGDEIPGDINYFGKDAFQNELDRPIDPFFGSPISNLSFDFGGLNSPPFHIDDFIGDDEMIQYFGA* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6628 600 Pfam Ethylene insensitive 3 37 284 IPR006957 GO:0005634
Psa5g6628 600 Gene3D - 71 147 IPR023278 GO:0003700|GO:0005634
Psa5g6628 600 Gene3D - 156 295 IPR023278 GO:0003700|GO:0005634
Psa5g6628 600 MobiDBLite consensus disorder prediction 333 391 - -
Psa5g6628 600 SUPERFAMILY DNA-binding domain of EIN3-like 165 288 IPR023278 GO:0003700|GO:0005634
Psa5g6628 600 MobiDBLite consensus disorder prediction 61 82 - -
Psa5g6628 600 Coils Coil 36 56 - -
Psa5g6628 600 MobiDBLite consensus disorder prediction 333 378 - -
Psa5g6628 600 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 9 598 IPR006957 GO:0005634
Psa5g6628 600 PANTHER ETHYLENE INSENSITIVE 3-LIKE 3 PROTEIN 9 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6628 Psa-Chr5 554867805 554870833 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6628 17 600 EIL Transcription Factor Family AT1G73730 51.096 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Psa5g6628 EIN3 2.7e-127 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6628 5 554867805 554870833 Psa5g6628 5 554867805 554870833 ECH