Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6575 ATGATGGCTGATAGGAGGCACCAATATCCAACACTAGCACAAAAGTTTGGCTCTCAACTTCATCTAAGATCCAACCTTTCATCCTCAAATGCAGTGTTTGTTCCATCACCATCAGAGAAAAACTTTGCAAGCTTTGCAACTGATTTTCTGATGGGTGGAGTTTCTGCAGCAGTGTCGAAATCTGTAGCTGCTCCTATCGAACGCGTGAAGCTTCTGATTCAAAATCAAGACGAGTTGCTTAAGGCTGGTAGGCTTTCCGAACCTTACAAAGGAATTGGAGATTGTTTTGGTAGAACAATTAAAGACGAAGGATTCGCTTCACTTTGGAGAGGTAACACTGTCAATGTTATCCGTTACTTCCCAACGCAGGCCTTCAACTTTGCATTCAAAGACTACTTCAAGAAGCTATTTAACTTCAAGCAAGAGAGAGATGGATATTGGAAAGTGTTTGCAGGAAATATTGCATCTGGTTCTGCAGCAGGAGCTTCATCCTCCATCTTTGTTTACTCATTGGATTACGCCCGAACGCGACTTTCAAGTGACGCGAAGACAGTGAAGAAAGGCGGAGAGAGGCAGTTCAATGGCCTGATTGATGTCTATAAGAAGACATATCAATCAGACGGTATTGTTGGCCTTTATCGCGGTTTCAATGTTTCGATTGTTGGAATCACTGTCTACCGCGGTTTGTATTTCGGAATGTATGATTCTCTTAAACCAGTTCTCTTAGTAGGAACATTTCAGGATAATTTCCTTGCTAGCTTTGTGCTAGGATGGATAGTTACAGTTGGAGCTAGCGTAGCATCTTACCCCTTCGACACGGTTCGTAGAAGAATGATGATGACATCAGGTGAAGCTGTAAAGTACAAGAGTTCAATGGATGCTTTCACACAAATTGTGAAAACTGAAGGTCCAAAGTCTCTCTTCAAAGGTGCTGGTGCAAACATACTTAGAGCAGTTGCTGGTGCTGGTGTGCTTGCAGGTTATGATAAACTTCAGGTGATTATGTTGGGAAAGAAATATGGTTCTGGTGGAGCTTAG 1038 0.4249 MMADRRHQYPTLAQKFGSQLHLRSNLSSSNAVFVPSPSEKNFASFATDFLMGGVSAAVSKSVAAPIERVKLLIQNQDELLKAGRLSEPYKGIGDCFGRTIKDEGFASLWRGNTVNVIRYFPTQAFNFAFKDYFKKLFNFKQERDGYWKVFAGNIASGSAAGASSSIFVYSLDYARTRLSSDAKTVKKGGERQFNGLIDVYKKTYQSDGIVGLYRGFNVSIVGITVYRGLYFGMYDSLKPVLLVGTFQDNFLASFVLGWIVTVGASVASYPFDTVRRRMMMTSGEAVKYKSSMDAFTQIVKTEGPKSLFKGAGANILRAVAGAGVLAGYDKLQVIMLGKKYGSGGA* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6575 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 248 334 IPR018108 -
Psa5g6575 345 Pfam Mitochondrial carrier protein 147 241 IPR018108 -
Psa5g6575 345 Pfam Mitochondrial carrier protein 248 335 IPR018108 -
Psa5g6575 345 Pfam Mitochondrial carrier protein 44 139 IPR018108 -
Psa5g6575 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 148 240 IPR018108 -
Psa5g6575 345 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 28 345 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g6575 345 PRINTS Adenine nucleotide translocator signature 45 57 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g6575 345 PRINTS Adenine nucleotide translocator signature 89 110 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g6575 345 PRINTS Adenine nucleotide translocator signature 122 134 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g6575 345 PRINTS Adenine nucleotide translocator signature 148 161 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g6575 345 PRINTS Adenine nucleotide translocator signature 253 269 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g6575 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 43 136 IPR018108 -
Psa5g6575 345 SUPERFAMILY Mitochondrial carrier 41 330 IPR023395 -
Psa5g6575 345 PANTHER ADP,ATP CARRIER PROTEIN, MITOCHONDRIAL 28 345 - -
Psa5g6575 345 Gene3D Mitochondrial carrier domain 46 341 IPR023395 -
Psa5g6575 345 PRINTS Mitochondrial carrier protein signature 48 61 IPR002067 GO:0055085
Psa5g6575 345 PRINTS Mitochondrial carrier protein signature 61 75 IPR002067 GO:0055085
Psa5g6575 345 PRINTS Mitochondrial carrier protein signature 111 131 IPR002067 GO:0055085
Psa5g6575 345 PRINTS Mitochondrial carrier protein signature 163 181 IPR002067 GO:0055085
Psa5g6575 345 PRINTS Mitochondrial carrier protein signature 213 231 IPR002067 GO:0055085
Psa5g6575 345 PRINTS Mitochondrial carrier protein signature 257 279 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6575 Psa-Chr5 552675158 552677116 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6575 8 345 Antiporters AT5G13490 76.401 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6575 K05863 - gmx:100800843 528.48