Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6268 ATGGTGAAAATGAGGTCTGGTTTTTTCTTGGTCATGGCAATGATGTTTCTCATTTCTTCATTGTCTTCTGGTTACAAATTTAACGTTGGTGGAAAAGATGGTTGGGCTGTGAAACCCTCTGCAGGCTATGCTAAATGGGGTCATTCACTAAGGTTTCAAATCAACGACACACTTTATTTTAAGTATGATAAAGCATATGATTCAGTGTTGGTGGTGAATGAAAAAGACTATGATTCGTGCAACACTAAGAATCCGATCAAGAAGTTGGAAGGTGGAGAATCGATTGTTAATTTGGATAGATCCGGTGGTTTTTACTTCATCAGTGGAAACGTTGAGAATTGTGGAAAGGGTGAAAAGTTGACTGTTGTTGTTTTGTCTCCAAGACAAGGCCCCGGGCATCATGGTCCGGCAACATCACCATGGGTTGAACCAGTACACTCGCCTGCACCGTCGTGGAAAGCTCCGGCACCAGAATGGAAGGCTCCCGCACCCGGTTATAAGGCTCCATCACCAAGTGCACCTGGATGGGAGGCTCCATCACCCGGTTGGACAGCACCCCCACCAGCATGGAAAGCTCCGTCGCCCAGTTGGACGGCACCTACACCAGCATGGAAATCTCCCGCACCCGGTTATAAGGCTCCGTCACCCAGTTGGACAGCACCTGCACCAGCATGGAAATCTCCCGCACCCGGTTATATGGCTCCTGCACCAAGTGTGCCTGGATGGAAGGCTCCATCACCCAATTGGAAGTCTCCTTCACCAGGGTGGACTGCTCCAGCACCTGGTTATAAGGCTCCATCACCAAGTGCGCCCGGATGGAAGGCTCCGTCACCAAGTTGGACTGCTCCCTCACCTGGTTGGACTGCTCCTGCACCTGAATGGAAGGCCCCATCACCAACTGCACCCGGGTGGAAGGCTCCAACACCAAGTTGGACTGCTCCCCCACCCGAATGGACCGCTCCTGCACCAAATACACCTGAAAGGAATTCTCCAGCACCAAGCCCGGGTTCGACTGCTCCGACACCAAGTGGCCCCGTAAGTATTCCTCCCTCTCCGGAACCAAGCGAAAATGCTCCAGCACCATCCCCTCGATCGAGTGGTTCCAGAAATGTAGGCGTTTCTCATGGTGTCATTGTTGCTGTGGCTTTAGTCTTAGCCAACCTTGTTTTTTAG 1173 0.5141 MVKMRSGFFLVMAMMFLISSLSSGYKFNVGGKDGWAVKPSAGYAKWGHSLRFQINDTLYFKYDKAYDSVLVVNEKDYDSCNTKNPIKKLEGGESIVNLDRSGGFYFISGNVENCGKGEKLTVVVLSPRQGPGHHGPATSPWVEPVHSPAPSWKAPAPEWKAPAPGYKAPSPSAPGWEAPSPGWTAPPPAWKAPSPSWTAPTPAWKSPAPGYKAPSPSWTAPAPAWKSPAPGYMAPAPSVPGWKAPSPNWKSPSPGWTAPAPGYKAPSPSAPGWKAPSPSWTAPSPGWTAPAPEWKAPSPTAPGWKAPTPSWTAPPPEWTAPAPNTPERNSPAPSPGSTAPTPSGPVSIPPSPEPSENAPAPSPRSSGSRNVGVSHGVIVAVALVLANLVF* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6268 390 Pfam Plastocyanin-like domain 35 117 IPR003245 GO:0009055
Psa5g6268 390 MobiDBLite consensus disorder prediction 128 156 - -
Psa5g6268 390 CDD OsENODL1_like 25 125 IPR041846 -
Psa5g6268 390 PRINTS Proline rich extensin signature 136 152 - -
Psa5g6268 390 PRINTS Proline rich extensin signature 162 174 - -
Psa5g6268 390 PRINTS Proline rich extensin signature 177 198 - -
Psa5g6268 390 PRINTS Proline rich extensin signature 203 219 - -
Psa5g6268 390 PRINTS Proline rich extensin signature 220 237 - -
Psa5g6268 390 PRINTS Proline rich extensin signature 243 268 - -
Psa5g6268 390 PANTHER BLUE COPPER PROTEIN 3 141 IPR039391 GO:0009055
Psa5g6268 390 ProSiteProfiles Phytocyanin domain profile. 25 126 IPR003245 GO:0009055
Psa5g6268 390 PANTHER EARLY NODULIN-LIKE PROTEIN 3 141 - -
Psa5g6268 390 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
Psa5g6268 390 MobiDBLite consensus disorder prediction 267 370 - -
Psa5g6268 390 MobiDBLite consensus disorder prediction 290 359 - -
Psa5g6268 390 Gene3D - 24 128 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6268 Psa-Chr5 533686666 533687966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g6268 1 151 Phytocyanin Superfamily AT5G53870 47.020 5.39e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6268 - - mtr:MTR_2g090575 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6268 5 533686666 533687966 Psa5g6268 5 533686666 533687966 ECH