Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5140 ATGGGGTCTGAAAAGCTTAGATCTTATGCAAACTTCTTTGAGAACTCTATGCCTTATTTTGCCATGATCCTTTTGCAGTTTGGCTATGCAGGCATGAACATTATAACCAAGCTTTCTCTCAATGGTGGCATGAGTCACTATGTTCTTGTTGTTTATCGCCACGCTTTCGCAACCATCGCGATAGCTCCGTTCGCCATTATCTTCGAAAGGAAGGCTCAACCAAAGATTACATTTCCAATTTTCATGCAAATTCTTCTCCTAGCTTTACTTGGGCCAGTGATAGATCAAAACTTATACTATGCTGGGTTGAAATTAACATCTCCAACTTTCTCATGTGCAATGAGCAATATGCTTCCTGCAATGACTTTCGCGATCGCGGTTTTATGCCGGATGGAAATTATAAACATGAAGAAGTTGAGATGCCAAGCAAAGGTGGTTGGGACTTTATTAACTGTGGCTGGAGCAATGTTGATGACATTATACAAAGGTCCTATTTTGGATTTGCTATGGACTAAAGATTCTCCTCATAGTAATCAAATTTCAACAAACATCACAAGATCCTCAAGCAAAAATAATTGGCTCATTGGTTCCATTCTACTCATAATTGCTACACTTGCATGGTCATCTCTCTTTGTGTTACAAGCTAGGGCTATAGAAACATACAAGAATCATCAGCTAACACTCACATCACTTATATGTTTCTTTGGAACACTTCTGGCTTTTGCTGCAACTTTGGTTATGGAACACAAAGTTTCAGTGTGGACTATTGGTTGGGATATGAATTTATTAGCTTCTGCATATGCTGGGATAGTTGCATCAAGTATATCATATTATGTACAAGGATTGGTAATAAAAAAGAAAGGACCTGTTTTTGCAACTTCATTTAGTCCTTTGATGATGATCATTGTGGCAATTATGGGTTCATTTTTCCTTGCAGAACAGATTTTTCTTGGAAGTGCAATTGGTTCCATCTTGGTTGTCATAGGCTTATATTCAGTTTTATGGGGAAAGCACAAAGAACAATTGGAAAGTAAAGTGGCACCAGATGATAAACCATTGCCCATAAAGGGTGTTTGGGTGAATGGAAATAAAGGAACACTTTCTGAAGCCATTGATCAACTTAGTGAAGCAAAATCAGATCAGAAAGTAGAATCAAACATTTCTCTTGTTATTATAAATTACAACAAAAGTTAA 1194 0.3735 MGSEKLRSYANFFENSMPYFAMILLQFGYAGMNIITKLSLNGGMSHYVLVVYRHAFATIAIAPFAIIFERKAQPKITFPIFMQILLLALLGPVIDQNLYYAGLKLTSPTFSCAMSNMLPAMTFAIAVLCRMEIINMKKLRCQAKVVGTLLTVAGAMLMTLYKGPILDLLWTKDSPHSNQISTNITRSSSKNNWLIGSILLIIATLAWSSLFVLQARAIETYKNHQLTLTSLICFFGTLLAFAATLVMEHKVSVWTIGWDMNLLASAYAGIVASSISYYVQGLVIKKKGPVFATSFSPLMMIIVAIMGSFFLAEQIFLGSAIGSILVVIGLYSVLWGKHKEQLESKVAPDDKPLPIKGVWVNGNKGTLSEAIDQLSEAKSDQKVESNISLVIINYNKS* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5140 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Psa5g5140 397 PANTHER WAT1-RELATED PROTEIN 12 373 - -
Psa5g5140 397 PANTHER WAT1-RELATED PROTEIN 12 373 IPR030184 GO:0016021|GO:0022857
Psa5g5140 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 339 - -
Psa5g5140 397 Pfam EamA-like transporter family 195 334 IPR000620 GO:0016020|GO:0016021
Psa5g5140 397 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5140 Psa-Chr5 449166793 449170958 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g5140 1 374 Nodulin-like Gene Family AT5G07050 65.707 5.44e-176 494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5140 5 449166793 449170958 Psa4g3343 4 284560434 284565256 PCT