Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4990 ATGGCCACCATTGTTGCTCCTAGCCAAATTTCTCCTGTTGAAGATGCTGAAGCTCTACGACTTGCTTTCAAAGGATGGGGTGCTGATAACAAGGCCATTATAGCAATTTTGGGTCATAGAAATGTTCATCAGAGGCAACAAATTAGAAAGGCTTATGACGAGCTTTTCGAAGAGGATCTCCTCAAACGTCTCGAGTCAGAGATCTCTGGCGATTTTGAGAGAGCTGTGTACCGCTGGATTCTGGAACCTGCAGACCGCGATGCTGTTTTGATCAATGTAGCAATCAAGCATGGCGGCAAAGACTATCATGTGGTTGCTGAAATCGCTTCCGTGCTATCAGCCGAAGAGCTTTTGGCAGTGAGGCGCGCCTATCGTAACCGCTACAAGCGATCTATCGAGGAAGACGTGTCTGCTAACACCACCGGTCATCTTCGTCAGCTTTTGGTTGGATTGGTGAGCTCATTTAGGTACGAAGGAGACGAAATCAATCCGAAATTAGCACAAAGCGAAGCTCATATCATTCACGAAAGTCTCAAAGAAAAGAAAGGAAACAACGAAGAAGAAGTCATTAGGATTCTCACTACGAGAAGCAAGACTCAACTTGTGGCAACTTTCAATCGCTATAGAGACGAACATGGCGTCTCCGTCAGTAAGAAATTGTTGGATCAAACATCCGATGATTTCCACAAGGCGTTACACACGGCTATTCGTTCGATCAATGATCACAAAAAGTACTACGAGAAGGTTTTGCGTAATGCGATCAAAAAGTTTGGGACGGACGAGGATGCACTAAGCCGCGTGATTGTTACGAGGGCCGAGAAGGATTTGAAGGACATCAAGGAGCTGTACTACAAGAGAAACAGTGTTCATCTTGAAGATGCAGTGTCCAAAGAAACCTCAGGAGATTACAAGAAGTTCATTCTTGCTCTTTTGGGGAAGCAAGAGTGA 948 0.4515 MATIVAPSQISPVEDAEALRLAFKGWGADNKAIIAILGHRNVHQRQQIRKAYDELFEEDLLKRLESEISGDFERAVYRWILEPADRDAVLINVAIKHGGKDYHVVAEIASVLSAEELLAVRRAYRNRYKRSIEEDVSANTTGHLRQLLVGLVSSFRYEGDEINPKLAQSEAHIIHESLKEKKGNNEEEVIRILTTRSKTQLVATFNRYRDEHGVSVSKKLLDQTSDDFHKALHTAIRSINDHKKYYEKVLRNAIKKFGTDEDALSRVIVTRAEKDLKDIKELYYKRNSVHLEDAVSKETSGDYKKFILALLGKQE* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4990 315 Pfam Annexin 87 151 IPR018502 GO:0005509|GO:0005544
Psa5g4990 315 Pfam Annexin 248 310 IPR018502 GO:0005509|GO:0005544
Psa5g4990 315 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Psa5g4990 315 Pfam Annexin 171 233 IPR018502 GO:0005509|GO:0005544
Psa5g4990 315 PANTHER ANNEXIN 7 314 - -
Psa5g4990 315 SUPERFAMILY Annexin 3 313 IPR037104 GO:0005509|GO:0005544
Psa5g4990 315 ProSitePatterns Annexin repeat signature. 258 310 IPR018252 GO:0005509|GO:0005544
Psa5g4990 315 Gene3D Annexin 165 240 IPR037104 GO:0005509|GO:0005544
Psa5g4990 315 Gene3D Annexin 82 152 IPR037104 GO:0005509|GO:0005544
Psa5g4990 315 ProSiteProfiles Annexin repeat profile. 82 153 IPR018502 GO:0005509|GO:0005544
Psa5g4990 315 ProSiteProfiles Annexin repeat profile. 241 312 IPR018502 GO:0005509|GO:0005544
Psa5g4990 315 SMART annex3 99 151 IPR018502 GO:0005509|GO:0005544
Psa5g4990 315 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Psa5g4990 315 SMART annex3 258 310 IPR018502 GO:0005509|GO:0005544
Psa5g4990 315 SMART annex3 183 235 IPR018502 GO:0005509|GO:0005544
Psa5g4990 315 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Psa5g4990 315 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Psa5g4990 315 PRINTS Annexin family signature 91 112 IPR001464 GO:0005509|GO:0005544
Psa5g4990 315 PRINTS Annexin family signature 174 200 IPR001464 GO:0005509|GO:0005544
Psa5g4990 315 PRINTS Annexin family signature 254 274 IPR001464 GO:0005509|GO:0005544
Psa5g4990 315 PRINTS Annexin family signature 298 311 IPR001464 GO:0005509|GO:0005544
Psa5g4990 315 Gene3D Annexin 243 313 IPR037104 GO:0005509|GO:0005544
Psa5g4990 315 ProSiteProfiles Annexin repeat profile. 165 237 IPR018502 GO:0005509|GO:0005544
Psa5g4990 315 PANTHER ANNEXIN 7 314 - -
Psa5g4990 315 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Psa5g4990 315 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Psa5g4990 315 PRINTS Plant annexin signature 118 132 IPR009118 -
Psa5g4990 315 PRINTS Plant annexin signature 160 180 IPR009118 -
Psa5g4990 315 PRINTS Plant annexin signature 226 244 IPR009118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4990 Psa-Chr5 442537901 442540221 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4990 5 442537901 442540221 Psa4g3410 4 289163645 289165270 PCT