Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4874 ATGACTAAACCGCAACCAATCTTCACGGCGGCGGCGACAGGAAACACACCTCCTACTCCGGCCATTACTTCCACCGACCAAAGAAGAAAACGCTGCGGAACTCCAACCACATCACTTTCCCTCGACGGAGACATCCTCTGTATCATCTTCGCTTTCCTCAACATGTTCGATCTCGTTCGCTGCTCTCTCGTTTGCAAATTCTGGAATGCAATCCTTGAGTCTCGATCGCTGCGAGAGTTTTACGAGAAGAAGTTGCTGAAGGATTCTTCGAGTTCATCTGAATCGACTAAAAAGTCCTTGAGTGTTGTTTTACGGGAAGTAGCTATGGAGCAGCATAGATTGGCGCTTCAATGTGGTGCATTTCATGTTGATCAGTGGAAGGGTCATTCAACAGCGGTTTCTCAATGTCGGATGAAAATGGGTACAGTTGTTACTGGTGTGGGAGATAAGGTTATCCGTGTCTGGTCATTAGACCGCTATAAATGTGAAGAAGAATACTCGGTACCTGATACGCTACCTCTAGTTGACTTTGATTTTGACGAGAGCAAGATTGTTGGTCTAATTGGAAGTCGTTTGTGCATATGGAGGCGGAATGGGAAAAGAAGTGTATTTCCTTCTCTTGAAGGCAAATTCATAACAGGTTCATGCATGCGTTACTTTGATCCAGAAGCTATGGTTGGATTTGATGACGGGGCTGTTCGTGTTTTTGACATGTACAGTAGGAGATGTTCTCAAATAATAAGAATGCATTCGGCACCTATAACTTGTTTATGTTTAAGTGAAGATCAACTGATAGTAAGTGGCTCCGCTTCAGGGAATATAACAATATCAGATCCTTCTTCTGTTCAGAAAGTAGCAAGACTTGGATCAAGTGATTTTAGAGGCATAAAGACGTTGTGTTTAAAACCTTCGTCACAGCTGCTGTTTGCCGGATCAGCTGTTGGATACACATATTGTTGGGATATGAGAACAAGGAGACTGTTGTGGGAGAAACGGGTGAGTCCTAATGTCGTTTACTCTTTACAGCACATGCAAAATGACAAATCAACATTGGCTGTTGGAGGAATAGATGGTATCTTAAGATTTGTAAATCAAAATGATGGCAATATTGTTTCAAGTTGTATTATGGAGGATAAATTGTGGGCAACATATCAAAGTCATTCGGGCAGTATCCGAAGAAAGAAGGGGAAGAGATTGCCAGAGGATACCTACATAAATATTGATGTCATTCCGAAGAATTCTCGACCTTCGATTACATGCCTTGCCGTTGGAATGAAGAAGATTGTTACCACACATAATGCCAGAGACATCAGATTGTGGAAATTGAAAGACAAAAATATCTATGACCGATTATCTTGTTTGATGGATATGGAGAAGAAACATTCTTATAAAAGGATCTTTGGTTGGAGATGA 1413 0.4168 MTKPQPIFTAAATGNTPPTPAITSTDQRRKRCGTPTTSLSLDGDILCIIFAFLNMFDLVRCSLVCKFWNAILESRSLREFYEKKLLKDSSSSSESTKKSLSVVLREVAMEQHRLALQCGAFHVDQWKGHSTAVSQCRMKMGTVVTGVGDKVIRVWSLDRYKCEEEYSVPDTLPLVDFDFDESKIVGLIGSRLCIWRRNGKRSVFPSLEGKFITGSCMRYFDPEAMVGFDDGAVRVFDMYSRRCSQIIRMHSAPITCLCLSEDQLIVSGSASGNITISDPSSVQKVARLGSSDFRGIKTLCLKPSSQLLFAGSAVGYTYCWDMRTRRLLWEKRVSPNVVYSLQHMQNDKSTLAVGGIDGILRFVNQNDGNIVSSCIMEDKLWATYQSHSGSIRRKKGKRLPEDTYINIDVIPKNSRPSITCLAVGMKKIVTTHNARDIRLWKLKDKNIYDRLSCLMDMEKKHSYKRIFGWR* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4874 470 Pfam F-box-like 44 74 IPR001810 GO:0005515
Psa5g4874 470 ProSiteProfiles F-box domain profile. 35 84 IPR001810 GO:0005515
Psa5g4874 470 Gene3D - 117 223 IPR015943 GO:0005515
Psa5g4874 470 PANTHER WD40 REPEAT PROTEIN 25 443 - -
Psa5g4874 470 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 25 443 - -
Psa5g4874 470 MobiDBLite consensus disorder prediction 1 22 - -
Psa5g4874 470 Gene3D - 40 77 - -
Psa5g4874 470 SMART fbox_2 41 81 IPR001810 GO:0005515
Psa5g4874 470 SUPERFAMILY F-box domain 41 81 IPR036047 GO:0005515
Psa5g4874 470 Gene3D - 224 467 IPR015943 GO:0005515
Psa5g4874 470 SUPERFAMILY WD40 repeat-like 125 440 IPR036322 GO:0005515
Psa5g4874 470 SMART WD40_4 324 364 IPR001680 GO:0005515
Psa5g4874 470 SMART WD40_4 119 156 IPR001680 GO:0005515
Psa5g4874 470 SMART WD40_4 403 441 IPR001680 GO:0005515
Psa5g4874 470 SMART WD40_4 240 278 IPR001680 GO:0005515
Psa5g4874 470 SMART WD40_4 281 321 IPR001680 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4874 5 434637974 434646825 Psa4g3345 4 284658461 284661434 PCT