Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4613 ATGAACGAATTTCACATTCTTTGGTTCTTAGGTTTGAACAGTGATCCCTCTGATTCTGTTAAGTTTATAAAAGATAAACTACTAGGTGGACTTCTAGCAGCTGGCTTTGACGATGGGTCATGTCTCAGCAGGTATCATTCAGTTAAAGGACTATCAGGAAATCCCTCCTCTTACCTCATCTCCAGATTAAGAAAATATGAAGCTCTCCACAAAAAATGCGGACCTTATACTGAATCCTACAATAAAACGGTGAAAGATCTCAGTTCAGGTCAGTTAAGCGAGTCCTCGGATTGTAAATACGTGGTTTGGATTTCATTTAGTGGTTTAGGGAACCGGATATTGACCTTGGCTTCTGCATTTCTTTATGCTCTCCTCACAAACCGTGTTCTTTTGGTTGATCATGGAGTTGATATGGCTGATCTCTTCTGCGAACCAATTCCAGATGTTTCATGGTTTCTCCCTCCCGATTTCCCTCTCAACAGTCAGTTTCACGGTTTCAATCAGAAGTCTGATCAATGTCATGGAAAAATGCTGAAAAATAAATCAGTCACAAATTCGAAAGTGCCTTCTTCTGTCTACCTTCATTTGGTACATGATTACGATGATGAGGATAAGCTATTCTTCTGCGATGAAGAACAAAATTTTCTGCAGAAAGTACCTTGGTTATTGATGAAAACGGATACTTACTTTATTCCATCGCTATTCTTGATGTCGTCTTTCGATCAGGAGCTCAGTAATCTCTTTCCAAACAAGGAGAAAGTCTTCCATTTCTTAGGCAGGTATTTGTTCCACCCTACAAACAAAGTTTGGGGTTTTGTTACTAGATACTATGAAGCTTATTTAGCTAATGTTGATGAAAGAGTCGGCATCCAGATTAGGGTGTTCGACACTAGACCCGGTCCATTTCAATATGTATTGGATCAAATCCTTGCTTGTACTTTGAAGGAAAATCTCTTGCCTGATGTTGACAAGAAGCATGGTATTACTGGTTCATTCGGAAGATCAAAGTCGAAAGCAGTACTAATGACATCCTTAAGCTCCGGCTATTTCGAAAAAATAAGAGACATGTATTGGGAATATCCAACTCTGACAGGAGAAGTTATCGGTGTATACCAACCAAGCCATGAGGGATATCAGCAAACCGAGAAGCAAATACACAACCAAAAAGCTTGGGCGGAAATGTATTTATTGAGTTTAACCGATGTGTTGGTGACTAGCTCCTGGTCTACTTTCGGCTACGTGGCACAGGGGCTTGGAGGTTTGAAACCTTGGATACTATACAAACCTGAGAATGAAACAGCTCATGATCCCCCTTGTCGACGTGCAATGTCGATGGAGCCGTGTTTTCATGCTCCTCCTTTATATGATTGCAAGGCTAAGAGAGGAGCTGATACAGGTGCAGTTGTTCCACATGTAAGACATTGTGAGGATATGAATTGGGGTCTTAAAATTGTAGACAATCATGGTTAG 1470 0.4061 MNEFHILWFLGLNSDPSDSVKFIKDKLLGGLLAAGFDDGSCLSRYHSVKGLSGNPSSYLISRLRKYEALHKKCGPYTESYNKTVKDLSSGQLSESSDCKYVVWISFSGLGNRILTLASAFLYALLTNRVLLVDHGVDMADLFCEPIPDVSWFLPPDFPLNSQFHGFNQKSDQCHGKMLKNKSVTNSKVPSSVYLHLVHDYDDEDKLFFCDEEQNFLQKVPWLLMKTDTYFIPSLFLMSSFDQELSNLFPNKEKVFHFLGRYLFHPTNKVWGFVTRYYEAYLANVDERVGIQIRVFDTRPGPFQYVLDQILACTLKENLLPDVDKKHGITGSFGRSKSKAVLMTSLSSGYFEKIRDMYWEYPTLTGEVIGVYQPSHEGYQQTEKQIHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENETAHDPPCRRAMSMEPCFHAPPLYDCKAKRGADTGAVVPHVRHCEDMNWGLKIVDNHG* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4613 489 Pfam Xyloglucan fucosyltransferase 24 458 IPR004938 GO:0008107|GO:0016020|GO:0042546
Psa5g4613 489 PANTHER FUCOSYLTRANSFERASE 2-RELATED 13 488 IPR004938 GO:0008107|GO:0016020|GO:0042546
Psa5g4613 489 Gene3D - 95 142 - -
Psa5g4613 489 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 13 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4613 Psa-Chr5 408358462 408362572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4613 25 485 Xyloglucan Fucosyltransferase1 AT2G03220 67.241 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4613 K13681 - gmx:100800258 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4613 5 408358462 408362572 Psa5g4613 5 408358462 408362572 ECH