Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3367 ATGTCATTTGATAAATTATTTCTAATTTCCTCTAATGGTCCTCATGCATTCCAAAAATGTTTCAATAATAGAACAATAGGCTCATTAGGCATTTGGTTTGGTGATAATCCATTTGATTTTGTTCTCCCCATCACATTGTGCCAAATCATTCTATCCTTCATGGTTTCTCGAACACTTTATTATGTCCTAAGACCTCTACAAACACCCAAATTCTTATGTTGTGTCATTGGTGGTGTTCTATTAGGGCCAACAGCCATAGGGCGAAACGTAAGATTAATGGATACATTGTTTCCACTAAAACAAGCTTCATTCTTAATAACATTGTCAAAAATAGGATCATCCTATTTTGTCTTCATCTACGCATTGAAGTTAGATGTAATAAACAACTTGAAAACAGCCAAACGTTGTTGGAGATTTGGTGTAATCCCTTACTACTCATGTTATTTCGCCACAACAATTCTCTTAGCTTTGTATAGACCACCTGAAGATCAAAACGAAAACAATACAGGCTCAGTATATTCAATCCCAAACGTCTTCACCATTTCTAGCTTCGCAGTTGTTTCTGAAGCCTTAACAGAACTCAACCTTATCAGCACAGAATTAGGACAAATCGCTTTATCTTCGTCAATGATTAGCGAAATCCTCCAATGGATTACTATAACCCTCCAATTCAGTTCAAAAATAAACTTTGTACTATCACTTGGATTCTTGGCTGGTACTTGCTTATTTGGTTTATCCTTCTTTTTCATTGTAAGACCAATGGCCAAATTGATCATTCAAAGAACCCCGGTCGGAAAACCGGTGAACGAAACATGTATAGTTATGATACTTTTGGGTGTTCTAGTTATGGCAGGCCTAAGCGATTTAGTTGGTTTACATTTTGTCATGGGACCTATTTTCTTTGGTTTGGTAATGCCTAATGGCCCTCCCTTGGCAACAACAATAATAGAGAGAAGTGAGTTAATCAATCAAGAATTTCTTATGCCATTTTTCTTTTTATATGTTGGCATAAGCACAAATTTTCGTGGAATCAACAAACACTGGAAGGTCGCTCTTACATTTCAAGCTATCTTATTTGTTGGATTCTTGACAAAAGTGATTGCATGCGTTCTTGTTTCTCCCACATATAACATGAGACATAAACATGGCTTGGTGCTTGGACTTATATTGAACATCAAAGGCATCCTCGAACTAATATTTTTCTCTAGACTCAAAAAACTCATGGTTATTGATGATGAAGTATATAGCCAAATGGTTCTATATGTCGTGTTGATGACCGGAATATGCATACCCTTGATAAAGTCTTTGTATAAACATCGATCTCGCGTGTTGATAGATAAAAGCATACATGAAGGTAGAGAAAGAACAATCCAAAGCACATCTAATAATTCAGAGCTCAGCATAATTTCTTGCGTACACAATGAAACAAATGTTCGTAGCATGATTGGTTTATTAGAAGCTTGTAACCCATCAAAAGGAAGTCCTTTATATGTCCACATTGTTCATCTCACAGAGTTATTAGGAAAAAGCACACCGATTCTGCTACCTATAAATATGAAAAACAAAATATCATTATCCATAAATTACCCTAACAGCAGACACATTTTACGTGCTTTCGAGAATTACTCCGATAATTCTAAAGGTCCGGTTACAATTAACGCGTATATTAATGTTTCACCTTACAATAGTATGCATGAAGCCGTTTGTAACCTCGCCGAAGACAAACTAGTTCATCTCCTCATCATTCCATTTCATGAAAATGATCAAAGTTTAGGTAACAATGTTGGACCTACAATTCGCGAGCTCAATAGTAATTTTCAAGCTTGCGCGCAATGTACCGTTGGAATATTGGTGGATAGATACTCGCAAATTAGTATGAGTGCAACCAATCTATCGTTTAATGTTGCTATATTTTTTGTTGGTGGACAAGATGATCGAGAAGCGTTGGCGTTGGGTATTCGAATGTTTGAACGGCCTAATACAAATGTTACATTATTTTGTTTCATCATTCATAATATTAGTGATAGTACTAATAATAATAATCGTTCAGGCATTGTTGAATATAAAGTTGATGATAAAGACGATGAAATATTCGAGAGTATGTTGGATGAGAGTTTGATAGATGAGTTTAAGGCTAAGAAAATTAGTAATGATAATGTTGTTTGTCATGAGATTGTGGTGGATGATTGTATACAAATGTTGGAAGCGATTCGAGGTTTAGAGAATGAAGACTATGATCTTGTGATGGTTGGTAAGAGACATAATATTGGTGATTTGACGGATGAAGAAATGTCAAATTTTATGGATAATGCAATTTTGTTGGGTGTTTTTGGAGATATGTTGGCATCTACTGAGTTTTGTAATGGAAAAGTTCCTATTTTGGTGTTGCAATGTGGAGATAAAAGAGTTAAACAATTTGAGAAGGTAGTGTCTCGTGTTAATACATTATTTTAG 2454 0.3529 MSFDKLFLISSNGPHAFQKCFNNRTIGSLGIWFGDNPFDFVLPITLCQIILSFMVSRTLYYVLRPLQTPKFLCCVIGGVLLGPTAIGRNVRLMDTLFPLKQASFLITLSKIGSSYFVFIYALKLDVINNLKTAKRCWRFGVIPYYSCYFATTILLALYRPPEDQNENNTGSVYSIPNVFTISSFAVVSEALTELNLISTELGQIALSSSMISEILQWITITLQFSSKINFVLSLGFLAGTCLFGLSFFFIVRPMAKLIIQRTPVGKPVNETCIVMILLGVLVMAGLSDLVGLHFVMGPIFFGLVMPNGPPLATTIIERSELINQEFLMPFFFLYVGISTNFRGINKHWKVALTFQAILFVGFLTKVIACVLVSPTYNMRHKHGLVLGLILNIKGILELIFFSRLKKLMVIDDEVYSQMVLYVVLMTGICIPLIKSLYKHRSRVLIDKSIHEGRERTIQSTSNNSELSIISCVHNETNVRSMIGLLEACNPSKGSPLYVHIVHLTELLGKSTPILLPINMKNKISLSINYPNSRHILRAFENYSDNSKGPVTINAYINVSPYNSMHEAVCNLAEDKLVHLLIIPFHENDQSLGNNVGPTIRELNSNFQACAQCTVGILVDRYSQISMSATNLSFNVAIFFVGGQDDREALALGIRMFERPNTNVTLFCFIIHNISDSTNNNNRSGIVEYKVDDKDDEIFESMLDESLIDEFKAKKISNDNVVCHEIVVDDCIQMLEAIRGLENEDYDLVMVGKRHNIGDLTDEEMSNFMDNAILLGVFGDMLASTEFCNGKVPILVLQCGDKRVKQFEKVVSRVNTLF* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3367 817 Gene3D - 44 444 IPR038770 -
Psa5g3367 817 PANTHER CATION/H + ANTIPORTER 24 802 - -
Psa5g3367 817 Pfam Sodium/hydrogen exchanger family 50 428 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Psa5g3367 817 PANTHER CATION/H+ EXCHANGER 3 24 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3367 Psa-Chr5 262555834 262558519 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3367 20 797 Antiporter Super Family AT2G13620 33.709 2.67e-137 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3367 - - mtr:MTR_3g071880 1135.94