Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3081 ATGCAGAAAGCCACTCTATTACTCTCACTACTCTTCCACTTTTTCTCGACCATAACCTCAAAATCAACAATCGAACCATGCACAAACTCCGACACATGCAACGCTTTACTCGGTTACACACTCTACACAGACCTCAAAGTCTCCGAAGTTTCATCTCTCTTCCAAATCGACCCTATCTCTCTCCTAACTGCCAATGCCATTGACATCTCTTACCCCGACGTAGAACACCACATCCTCCCTTCCAAACTCTACCTCAAAATCCCAATCTCATGTTCCTGTGTCGACGGGATTCGCAAATCCGTTTCCACCAACTACAAAATTCGTCCTTCTGACACTCTTTCCACCATTGCTGACTCTGTTTACGGTGGTTTGGTTTCTTCCGACCAGCTTAAAGAGGCTAATTCTATTTCCGATCCTTCTGTTCTTGATGTTGGACAGAACCTTGTTGTTCCTCTTCCTTGTACTTGTTTCAATGGTTCTGATAATGCTTTGCCTGCTATTTATCTGTCTTATGTTGTTCAGCCACTTGATAGTTTGAGTTATATTGCTGCTAGATATTTTACTACTCTTACCGATTTGATGAATGTTAATGCTATGGGAAGTACTTCTATCTCTGATGGTGATATTCTTGCTATTCCTATTCCGGCATGTGCTTCAAATTTTCCAAAATATGCTTCTGATTTCGGCTTGCTTGTCCCTAATGGAAGTTATGCCATTACAGCAGGCCACTGTGTGCAATGTAGCTGTGGACCCCGAAACTTAAATTTGTACTGTATGCCGGCTTCTCTAGCTGTTTCTTGCTCCAGCATGCAATGTAAAAGCAGCAATCTTATGCTTGGCAATGTTACCGTGCAACAGACTAGCGGTGGTTGTAATGTGACTTCTTGCAGTTATGATGGTCTTGTTAATGGCACCATAGCGACAATGTTGACACCGTCTCTTCAGCCTCGATGCCCAGGGGCACAGGAATTTCCTCCTCTTATCGCCCCACCTACAACTGTTGCGAGAGAATCAGTATTTGCACCGGCACCCTCACCATCATCGCTGTTAGATGGAATTGATGGGAGATCACCCAAATCCTCTGTGGTGCCTTCAACAGGATTTACTCCGGCTAATGGCCCTGTTAGTGGAATTTCTTCTGGTGCTTCTGCTGCATGCTCTTTGGTGAAACCATTACCCATTTTGACGGTTCCACTTGTGCTATTACTTGTCAAATTGATGATCCCCTTAGCATTGTAA 1239 0.4399 MQKATLLLSLLFHFFSTITSKSTIEPCTNSDTCNALLGYTLYTDLKVSEVSSLFQIDPISLLTANAIDISYPDVEHHILPSKLYLKIPISCSCVDGIRKSVSTNYKIRPSDTLSTIADSVYGGLVSSDQLKEANSISDPSVLDVGQNLVVPLPCTCFNGSDNALPAIYLSYVVQPLDSLSYIAARYFTTLTDLMNVNAMGSTSISDGDILAIPIPACASNFPKYASDFGLLVPNGSYAITAGHCVQCSCGPRNLNLYCMPASLAVSCSSMQCKSSNLMLGNVTVQQTSGGCNVTSCSYDGLVNGTIATMLTPSLQPRCPGAQEFPPLIAPPTTVARESVFAPAPSPSSLLDGIDGRSPKSSVVPSTGFTPANGPVSGISSGASAACSLVKPLPILTVPLVLLLVKLMIPLAL* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3081 412 CDD LysM 170 212 IPR018392 -
Psa5g3081 412 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 12 366 - -
Psa5g3081 412 SUPERFAMILY LysM domain 169 214 IPR036779 -
Psa5g3081 412 Pfam LysM domain 105 151 IPR018392 -
Psa5g3081 412 Pfam LysM domain 171 213 IPR018392 -
Psa5g3081 412 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 3 12 366 - -
Psa5g3081 412 CDD LysM 105 150 IPR018392 -
Psa5g3081 412 ProSiteProfiles LysM domain profile. 169 212 IPR018392 -
Psa5g3081 412 ProSiteProfiles LysM domain profile. 103 150 IPR018392 -
Psa5g3081 412 SMART LysM_2 170 213 IPR018392 -
Psa5g3081 412 SMART LysM_2 104 151 IPR018392 -
Psa5g3081 412 Gene3D LysM domain 99 159 IPR036779 -
Psa5g3081 412 Gene3D LysM domain 160 221 IPR036779 -
Psa5g3081 412 SUPERFAMILY LysM domain 104 152 IPR036779 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3081 17 387 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 70.856 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3081 - - gmx:100808966 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3081 5 238097218 238099284 Psa5g3081 5 238097218 238099284 ECH