Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2557 ATGATGATGATGTACGATGAGATGGGTTTATCTGGTGATATGGATGTGTTTTCTGGTCCCCTTGCCGAGGGGGATGTTTCGGCCCGGCAAACTGAACCTGGGGTGATGATTGGCGAAGATTACAGTGATGATGAAATGGATATTGATGAACTTGAGAAGAGGATGTGGAAGTACAAAATGCTTCACAAGCGGTTAAAGGATAAGGAACAAAGCAAGCCGAGGGAAGGATTCGATGCGGCGAAGCAGAGGCAATCCCAAGAACAGGCAAGGAGGAAGAAGATGTCGAGGGCTCAAGACGGAATCTTGAAGTACATGCTGAAAATGATGGAGGTTTGTAAGGCTCAAGGGTTTGTTTACGGGATAATTCCCGAGAAAGGGAAGCCTGTGACTGGGGCATCGGATAATCTCCGGGAGTGGTGGAAGGATAAGGTTAGGTTCGATCGGAATGGTCCTGCTGCGATATCGAAGTACCAAGCGGATAATGCGATTCCGGGGAACAACGATGGGAGTAATTCAATCGGTCCAACCCCTCATACCTTGCAAGAGCTGCAGGACACAACTTTGGGTTCTCTGTTATCAGCACTGATGCAACACTGTGATCCCCCTCAGAGGCGGTTTCCGTTGGAGAAGGGTGTTTCTCCTCCATGGTGGCCAACCGGGAACGAAGAGTGGTGGCCCCATATCGGTTTACCGAAAGATCAAGGTCCTCCGCCTTACAAGAAGCCTCATGATCTGAAGAAGGCATGGAAGGTTGGAGTCTTGACTGCGGTTATCAAGCACATGTCTCCCGACATTGCCAAAATTCGCAAGCTTGTGAGACAGTCCAAATGCCTTCAAGACAAAATGACGGCTAAGGAAAGCGCAACCTGGCTTGCAATTGTCAATCAAGAGGAGGCATTAGCGCGAGAGATTTATCCTGATTATGTTCCCCCGTTTACCGCATCTGGTGGAAGCGGGTCTTTTTCGGCCAATGATGGAAATGAGTACGATGTCGATGGGGGAGAAGACGAGCCAAATTTTGACATCGAGGAACGGAAACCTGAGAGTCTTCTTCTTCCATCCAACATCGGGATGATGGAGAGAATGAGGGGCATAAGACTGCCAATTCAGCCGCCTTCTTTCGCAATGAAGGGAGAAGCGGTAACAAACATGGATTTCATGCGGAAGCGAAAGATCTCTGGTGACTTTAACATGATGATGGATCCGAAGATTTTCACTTGCGAGCACCCTCCCTGTCCTTACAGCGAACTTCGTCTCGGTTTTCAGGACAGAACTTCTAGGGACAATCATCAATTGTGTTGTCCATATAGAGCCAATTTATCAGATTATGGTGGTCCAAGTTTTCATGCTAACGAGGTTAAGCCAGTCATATTCCCTCAGTCCTTTGTTCAACAGAAACCTACGGCTCAGTCTGTTAATATGGTTCCACCTTCAGTTAATCTCACCGGACTCGGAGTTTCAGAAGACGGTGAGAAAAATATCGGCGACCTTATGACAGTCTATGATTCCGATGTTCATCAAAGCAACCGGAACACTAACAATCGCGTGGCTGCTTCTTCCGCGGAGAATCACAACTTACCGCATCCTAGCAGCATTCAGCAGCAGCAGCAGAATTTCTACCGCGGTCAAGGATTGGTGATGGAAAGAACCAACATATCGAATAATAACCATCATCCCATGTTTGCAAGAGACGAAGGTCAATTCGACCGGTTCAGAGCTTTGAATTCTCCCTTCGAGAACAATCACAATCACAATCAGAGTCACAATCACAACAACAGCAACAACAATTTCCAGTTTATGTTTGGGTCCCCCCACTGTGATCTGTCATCCTTTGATTTTAAAGAGGACAGTCATGGAGTAGGCATGGATCCTCTGCAGAAACAGCAAGATATTTCAATATGGTACCAGTGA 1911 0.472 MMMMYDEMGLSGDMDVFSGPLAEGDVSARQTEPGVMIGEDYSDDEMDIDELEKRMWKYKMLHKRLKDKEQSKPREGFDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAISKYQADNAIPGNNDGSNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGNEEWWPHIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIVNQEEALAREIYPDYVPPFTASGGSGSFSANDGNEYDVDGGEDEPNFDIEERKPESLLLPSNIGMMERMRGIRLPIQPPSFAMKGEAVTNMDFMRKRKISGDFNMMMDPKIFTCEHPPCPYSELRLGFQDRTSRDNHQLCCPYRANLSDYGGPSFHANEVKPVIFPQSFVQQKPTAQSVNMVPPSVNLTGLGVSEDGEKNIGDLMTVYDSDVHQSNRNTNNRVAASSAENHNLPHPSSIQQQQQNFYRGQGLVMERTNISNNNHHPMFARDEGQFDRFRALNSPFENNHNHNQSHNHNNSNNNFQFMFGSPHCDLSSFDFKEDSHGVGMDPLQKQQDISIWYQ* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2557 636 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 2 635 IPR006957 GO:0005634
Psa5g2557 636 SUPERFAMILY DNA-binding domain of EIN3-like 177 301 IPR023278 GO:0003700|GO:0005634
Psa5g2557 636 MobiDBLite consensus disorder prediction 516 537 - -
Psa5g2557 636 Coils Coil 48 68 - -
Psa5g2557 636 Gene3D - 83 160 IPR023278 GO:0003700|GO:0005634
Psa5g2557 636 Gene3D - 175 308 IPR023278 GO:0003700|GO:0005634
Psa5g2557 636 Pfam Ethylene insensitive 3 49 298 IPR006957 GO:0005634
Psa5g2557 636 MobiDBLite consensus disorder prediction 67 94 - -
Psa5g2557 636 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 2 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2557 Psa-Chr5 197032101 197035722 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2557 3 635 EIL Transcription Factor Family AT3G20770 58.679 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Psa5g2557 EIN3 2.5e-128 No_clan