Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2090 ATGGTGGTAATCAGCGAAGAAACCGACCCTTATGCAGAAGAAGAAACAGAAACAGAAATAGAAAGTGTGGACTATGAGGAGCTGAAGAAACGCATGTGGAAGGACAAGATCCTTCTACAAAAATTCAAGGAAAAACAAGACAACAACACTGAACCTGAGCAACAAGCAAAACAAGAGGCATCTAGAAGGAAAAAGATGTCGAGAGCACAAGATTCAGTACTCAAATACATGGCAAAAATCATGGATGTTTGCAAAGCCAAAGGTTTCGTCTACGGAATCATCCCAGAAAAGGGTAAACCGGTATCAGGCTCCTCCGATAGTTTACGCGAATGGTGGAAAGATCAAATCCGGTTCGATCAAAGCGCGCCTCTTGCAGTCGCGAAATACTTACCACTTCTTGGAAAAGACGAACAGCTTAATACTATGATGAATGATCCAAACTCTTACATACACCTGCTTCAAGATTTACAAGATTCAACTCTTGGCTCGCTTCTTTCCGCTTTAATGCAACACTGTGTGCCACCACAGAGAAGGTTTCCTCTGGAAAGAGGAATATCTCCTCCGTGGTGGCCCACAGGATCGGAAATTTGGTGGGGCGAACAAGGTTTATTGGCTCAGGAACAAGGTCCGCCGCCTTATAAAAAGCCGCATGATCTTAAAAAAGCATGGGAAGTTTCTGTTTTAGCTGGTGTTATAAAACATATGTCACCTGATTTGGAGAAACTAAGGAGGTTGGTTACTCAGTCTAAGACTCTGCAAGATAAGATGACAGCAAGAGATAGTGCTACTTGGTGTAAAGTTATGAACCAAGAAGAAGCTTTGCTTGGTGTGACTAATAAGTGTTTTAAAATGTCTATTTCGGAGGAAGGTGAAAGTTCGGGTGGTAGTAGTAGCAGTAGCAGAAGTGAGAAAAGAAAGTGCGTGTTTGATGTCGGTGGCGATGATGTGGTGTTTCCACAGAATAAGTTACCTTTGAGTTTGGCAAATTTGCTTGATTGTGAAGCAAGAATTGAAAATGTTGATGAATGGTTGAAGATGGGAGAGATTGAAGGTGGGAAATTTGGATGGGATGTAGAGCATTGGTTGAATGATGTGGATGATCTTGACTTGGAAGCTGCACTTGAAATGGTGAAAGGTAATCACAACATGGATTTTATTCCTCAAAATCCAGCACATAATTTACATGGCCAAGAGAAAGAGAACTCTGTTTGGGATTTTACATATCAATACCATCATGAGCAAGACTAA 1248 0.4143 MVVISEETDPYAEEETETEIESVDYEELKKRMWKDKILLQKFKEKQDNNTEPEQQAKQEASRRKKMSRAQDSVLKYMAKIMDVCKAKGFVYGIIPEKGKPVSGSSDSLREWWKDQIRFDQSAPLAVAKYLPLLGKDEQLNTMMNDPNSYIHLLQDLQDSTLGSLLSALMQHCVPPQRRFPLERGISPPWWPTGSEIWWGEQGLLAQEQGPPPYKKPHDLKKAWEVSVLAGVIKHMSPDLEKLRRLVTQSKTLQDKMTARDSATWCKVMNQEEALLGVTNKCFKMSISEEGESSGGSSSSSRSEKRKCVFDVGGDDVVFPQNKLPLSLANLLDCEARIENVDEWLKMGEIEGGKFGWDVEHWLNDVDDLDLEAALEMVKGNHNMDFIPQNPAHNLHGQEKENSVWDFTYQYHHEQD* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2090 415 PANTHER ETHYLENE INSENSITIVE PROTEIN 11 409 - -
Psa5g2090 415 MobiDBLite consensus disorder prediction 43 67 - -
Psa5g2090 415 Gene3D - 141 280 IPR023278 GO:0003700|GO:0005634
Psa5g2090 415 Gene3D - 55 140 IPR023278 GO:0003700|GO:0005634
Psa5g2090 415 SUPERFAMILY DNA-binding domain of EIN3-like 150 274 IPR023278 GO:0003700|GO:0005634
Psa5g2090 415 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 11 409 IPR006957 GO:0005634
Psa5g2090 415 Pfam Ethylene insensitive 3 26 272 IPR006957 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2090 Psa-Chr5 162403207 162404972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2090 21 276 EIL Transcription Factor Family AT5G65100 61.679 5.62e-121 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Psa5g2090 EIN3 2.5e-114 No_clan