Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1021 ATGCAAGCGGTGGGGAGGTTAGGGAGCTACATTAGTCAAGGCGTATACACCGTTTCCGGACCCTTTCATCCATTCGGTGGCGCCGTCGATATCGTCGTCGTTCAACAGCAAGACGGTTCCTTCAAATCTTCGCCATGGTACGTTCGATTCGGCAAATTCCAAGGTGTTTTGAAATCAAAGGAGAAAATCGTTCAGATCAACGTGAACGACGTCGATGCTGATTTACAAATGCATCTCGATAACAAAGGGGAAGCTTTCTTTCTAAGAGAAATTGATGCGGAAACGGTTCTGATTGATTCAATTGAATCTGGTGATGGTGATGGTGATGATCTCGATGTTCAATCTTTAAAGTCTAAAAGTAGTAATTTCGGTTCTGAGGATGGGAAGATTGTAGGGAGGACTAATTCGAATTCTCGTCGTTCGCGGATACTTGGTCTTATGTTTGGGAGAAGGTCTTTGAGTGGTGAATTTGAAGATGCTATTGGGAATAAGGAACGTGCTGAGATTGCTGCTAATTTGTTGGATATTAAGTGGTCGACGAATCTTGATGGTGAGAATAATGGAGAGGCTGATCATGCTGTGGTCGTGGAGAATGTGGATGGTTCTTTTGGTGTTGCCAAGGTTGAGAAGAAATTGAGTGGAGGAGAGGTTTCTGTGGTGGAGGATGTTGAAGAGAGTTCGAAAGTTCGCATGGTTCGTTGTTTGAGTAAACAAACTCATGAGGTTATGTACCTTGCTCATGGGGAAAGTGGAGAGGTTCATGTCCATGATCAAGTCTTGCATTCACCCGTAACTCAGGGTACGGAAAATGAGGAAGTCACTAAGAATGCTGATGTAGTGGAAGTCTTTGAGTTTCATTCTCAGGCTCGGCGAATGGATTCTTCTGGTTCAGAAGCTAGTATGTACGATGTGGAGGATGTTGAAGACCTAACAACATCTCCAAAACCTCAAACCAACAATTTGGATGTAGGACATTGTTCAAGTGAGAAAGTTGAGTCCTATTGTGTAGACCTAACAACATCTCCAGAACCTCAAACAAACAACTTGGATATAGGACATTGTTCAAGTGAAAAGGTTGAGTCCTATTGTGTTACCAACTCCTCCGGTTACAACAGCCAGGATGACCAAGGATTATGTGAGAATAATATGAAGGATAAAAATGTCTCTAGCACACAACCAACTCCATCACACTCTCTTGGCGATTGTTTACCTAGTGAAATATCTAGGAGATCACTGTCCCCGAGTTTAGATGAAGAGAATTTCCTTTTTGGTGACTTTGATGAAAGTGGAGCTAATGATCAATTTGAGGGATCATTAAGTCCCAAATATATAGATAAAGAAGATGATACTTCTTTTGAGAGTGGAACTGAAAACTCAAGAGTGACTTCCTCTCCCATAGTTATCCCTAGAAACGAAGTCGGGCGGCACATTGGATCCTTGCCAAATATTTCTTCTGGTGGTAACAGTATGTGCCAACATGTTCGTTATCCTTTAAGTCAATCACTGGACTCGACATTTCCTGGCAAGGATAACTTGGAATGCTTAAAATTAGATGAGTACAAAGAAAAGCAGTTACCTAATGAGCAGGCAGATGCCAAAGATTGCCAAGATTCTGATGAACTCAAAGATACTGCTCTAAATGTTCCCCCTGGAGGTACATCAACAGGTAATTGGAGAATTTGGCCTTTCTCCTTGAGCAGTTCAGTATCTAGAGAATCTTTGCCGCCAATTCCAAATAATGCCAAAAATACTAGTTTTGGCAATTCTTCAGAGAATAAGATTTTCACAGATGTGAACAAAATTGATAGCAAACCCAATTTAACGACAAAGATAGTTAGGGAAACAACTCCAACTTCTGAAGAGATAGCATCATTGAATCTGAAGGAAGGGAGGAACATTGTAACCTTCACTTTTTCTACAGCTATGCTGGGGAAACAGCAGGTTGATGCTCAAATATATCTGTGGAAATGGAACGACCGCATAGTTATCTCGGATGTGGATGGGACAATTACAAAGTCAGATGTTCTTGGTCAGTTCATGCCTTTGGTTGGTGTTGACTGGTCACAGACAGGTGTTGCACATTTATTCTCCGCTGTCAAGGAGAATGGTTACCAACTGCTTTTTCTCAGTGCCCGTTCAATTTCTCAAGCCTATATTACACGACAATTCCTACTGAATCTTAAACAGGATGGCAAAATTTTACCCGAAGGTCCTGTTGTTATTTCCCCTGATGGACTTTTTCCCTCTCTATACCGTGAAGTTATTAGGAGGGTACCTCATGAATTCAAAATTGCATGCTTAGAGAGTATCAAGGCTCTTTTTCCTTCTGATTGCAATCCGTTCTACGCTGGTTTTGGAAATAGGGATACTGACGAAATCAGTTACCTCAAGGTTGGAATCCCTTTAGGGAAGATCTTCATTATAAATCCCAGGGGTGAGATAGTTGTGAACCGAAGTATTGACACAAAATCATATACTTCTATGCACGCCCTTGTGAACGGAATGTTCCCCCCAACGGGCTCGTCTGAGCAGGAGGATTTTAATTCATGGAATTTCTGGAAGCTACCCCCTTCTGCAATTGATATTTGA 2589 0.4175 MQAVGRLGSYISQGVYTVSGPFHPFGGAVDIVVVQQQDGSFKSSPWYVRFGKFQGVLKSKEKIVQINVNDVDADLQMHLDNKGEAFFLREIDAETVLIDSIESGDGDGDDLDVQSLKSKSSNFGSEDGKIVGRTNSNSRRSRILGLMFGRRSLSGEFEDAIGNKERAEIAANLLDIKWSTNLDGENNGEADHAVVVENVDGSFGVAKVEKKLSGGEVSVVEDVEESSKVRMVRCLSKQTHEVMYLAHGESGEVHVHDQVLHSPVTQGTENEEVTKNADVVEVFEFHSQARRMDSSGSEASMYDVEDVEDLTTSPKPQTNNLDVGHCSSEKVESYCVDLTTSPEPQTNNLDIGHCSSEKVESYCVTNSSGYNSQDDQGLCENNMKDKNVSSTQPTPSHSLGDCLPSEISRRSLSPSLDEENFLFGDFDESGANDQFEGSLSPKYIDKEDDTSFESGTENSRVTSSPIVIPRNEVGRHIGSLPNISSGGNSMCQHVRYPLSQSLDSTFPGKDNLECLKLDEYKEKQLPNEQADAKDCQDSDELKDTALNVPPGGTSTGNWRIWPFSLSSSVSRESLPPIPNNAKNTSFGNSSENKIFTDVNKIDSKPNLTTKIVRETTPTSEEIASLNLKEGRNIVTFTFSTAMLGKQQVDAQIYLWKWNDRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAVKENGYQLLFLSARSISQAYITRQFLLNLKQDGKILPEGPVVISPDGLFPSLYREVIRRVPHEFKIACLESIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPLGKIFIINPRGEIVVNRSIDTKSYTSMHALVNGMFPPTGSSEQEDFNSWNFWKLPPSAIDI* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1021 862 SMART lns2 661 817 IPR031315 -
Psa5g1021 862 SUPERFAMILY HAD-like 653 805 IPR036412 -
Psa5g1021 862 Pfam LNS2 (Lipin/Ned1/Smp2) 615 837 IPR013209 -
Psa5g1021 862 PANTHER LIPIN 1 861 IPR026058 -
Psa5g1021 862 Pfam lipin, N-terminal conserved region 1 95 IPR007651 -
Psa5g1021 862 PANTHER GH19076P 1 861 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1021 Psa-Chr5 77701693 77711274 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0289 6 8748409 8754293 Psa5g1021 5 77701693 77711274 PCT