Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0985 ATGGAAGCAGGGGAAAACTGTTGCGTAAAAGTTGCGGTTCACGTACGGCCGTTAATCGCCGACGAGAAGCTTCAAGGATGCAAAGACTGTGTCACCGTCGTCTCCGGGAAGCCTCAGGTACAAATTGGTGCCCACTCATTTACCTTTGATCATGTCTATGGAAGCACTGGTTCTCCCTCGGGTAACATGTTTGAAGATTGTGTTGCTCCACTTGTTGATGGTTTGTTCCAAGGATATAATGCTACTGTTTTGGCATATGGTCAGACAGGTTCTGGGAAAACATACACCATGGGAACTGGCTTTAAAGAAGGTTTCCAAACAGGAATAATACCACAAGTTATGAATATTTTGTTCAACAAAATTGGGACCTTCAAACACCAGATTGAATTTCAGTTGCATGTTTCCTTTATCGAGATTCTTAAAGAAGAAGTAAGAGATTTACTGGATCCCTCCTCCATGGGCAAACCAGAAACTACAAATGGACATTCAGGAAAAATGACATCTCCTGGGAAGCCGCCAATACAAATTCGCGAGACATCAAGCGGTGTTATAACCCTTGCAGGATCTACTGAAGTTAGTGTCACCACATTAAAAGAAATGGCTGCTTGCCTGGAACAAGGATCCTTGAGTAGAGCAACTGGGAGCACAAATATGAACAATCAATCCAGTCGATCTCATGCAATCTTCACCATCACATTAGAGCAAATGTGCAAGCCCAAGAATCCTAATGGCAGCTGCTTAAATGATACTATGAATGATGAGTATCTTTGTGCTAAGTTGCACTTGGTAGATCTTGCCGGATCAGAACGTGCTAAAAGAACAGGTTCTGATGGTATGCGTTTTAAAGAAGGCGTTCATATTAACAGAGGACTTCTAGCACTTGGTAATGTTATTAGTGCACTTGGTGATGAAAAGAAACGAAAGGAAGGTGTTCATGTTCCATATAGGGACAGTAAACTTACTAGGCTTTTACAGGATTCACTTGGGGGTAACAGCAGAACTGTCATGATTGCCTGCATAAGTCCTGCTGATATTAATGCTGAGGAAACCCTAAACACTTTGAAGTATGCAAATCGTGCACGCAATATCCAAAATAAGCCTGTTGTCAACAGAGATCCCATGTCCAGTGAGATGCTTAAAATGAGACAAAAACTGGAGTATTTGGAGGCAGAACTTTGTGCTCGTGCCGGTTGCTCATCTGGGGAAGTTCAGGGTCTTAAGGAAAGGATTGTTTGGCTTGAAGCTGCTAATGAAGACCTTTGCCGTGAACTTCATGAACACCGTAGTAGATGTTCTCTCTTAGAACAAAGTGAAAAGGATGCTTATGATGGTGGCACATGCATTGTGAAGACGGATGGGCTTAAGAGGACCTTACCTATCATAGCGGCTGATTACCCAATGAATGAAACCGCAGGTGATTCAAGAGAAATTGAAGAAGTAGAAAAAGAATGGGAGCACAAACTTTTGCAAAATAGTATGGATAGAGAGTTGCATGAGTTGAATAAACGCTTGGAACAAAAAGAGTTTGAGATGAAGCTGTTTGGGGTATCTGATGCTGAAATACTCAAGCAACGCTTTGGAAGGAAGATAATGGAACTAGAGGATGAGAAGAGAACAGTGCAGCGAGAAAGAGATTGTCTTTTGGCTGAAGTTGAAAATCTTGCTGCCAACTCTGATGGACAAACACAAAAACTAGAGGATACCCATTCCCAAAAATTGAAAACACTTGAAGCACAAATTTTGGATTTGAAGAAGAAGCAAGAGAATCAGGTCCAGCTTATGAAGCAAAAGCAAAAAAGTGATGAAGCAGCAAAGAGGTTGCAAGATGAAATACAGTCTATAAAGGCCCAAAAGGTTCAATTGCAACAAAGAATAAAACAAGAGGCAGAACAGTTTCGGCAGTGGAAGGCTTCTAGAGAGAAAGAACTGTTGCAATTAAAGAAGGAGGGAAGAAAAAATGAATATGAAAAGCACAAGCTGCAAGCTTTAAATCAGCGCCAGAAAATGGTCCTTCAAAGGAAAACTGAAGAAGCTGCAATGGCAACCAAAAGGTTAAAGGAGTTGCTTGAAGCTCGTAAAACTTCGAGCCGAGACACTTTCGTTGCAACAAATGGAAATGGAACAAACGGGCAGAGTAATGAGAAGTCCTTACAACGGTGGCTTGACCATGAACTAGAAGTCACGGTAAAAGAACATGAAGTTCGTTTTGAGTATGAGAAACAGAGCCAAGTGCGAGCTGCCCTTGCAGAGGAGCTAGCCATGCTGAAGCATGTAAGTGAGTTTGCTGCTAAGGGTCTCAGTCCACCAAGAGGAAAGAACGGATTTGCCAGGGCATCTTCCATGTCACCAAATGCAAGAATGGCTAGAATAGCTTCACTTGAGAACATGCTTAGTATATCCTCTAATTCACTTGTAGCAATGGCTTCTCAACTTTCCGAGGCAGAAGAACGAGAGAGGGCATTCACTAATCGTGGACGTTGGAATCAGTTGCGCTCAATGGGAGAGGCCAAGAATTTACTTCAATATATGTTTAATTCTGTTGGAGATGCTAGGTGCCAACTCTGGGAGAAGGACATGGAGATCAGAGAAATGAAAGATCAAATCAAAGAACTTGTTGGTCTTTTGCGGCAAAGTGAGATGAAGAGAAAGGAAGCTGAGAAGGAGGTAAAAGTGAGAGAGCAAGCTGGCACAACCACATTGGCTACCCCAGTTTCTGGAAGTTCTCCAAATTCCTTGAAACAGTATACTGAAGATATGAAGGGACCTTTATCTCCAATGTCTGTGCCAATACCAAGACAACTCAAATATACGCCAGGGGTTGCTAATAATGGCTTGACAAGGGAATCAGCAGCATTTGTTGATCAGGGTAGAAAGATGAAACCCATTGGGCAGCTGTCAATGAAAAAACTAGCAATGGTAGGACAAGCTTCTGGCAAGTTATGGAGGTGGAAAAGAAGCCATCATCAGTGGCTACTACAATTCAAGTGGAAGTGGCAGAAACCATGGAGGCTTTCAGAATGGATTCGACACAGTGATGAGACAATCATGAGAGCAAGACCGCGCTCACATGCTTTGCCACACAAAATGTGA 3090 0.4249 MEAGENCCVKVAVHVRPLIADEKLQGCKDCVTVVSGKPQVQIGAHSFTFDHVYGSTGSPSGNMFEDCVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKEGFQTGIIPQVMNILFNKIGTFKHQIEFQLHVSFIEILKEEVRDLLDPSSMGKPETTNGHSGKMTSPGKPPIQIRETSSGVITLAGSTEVSVTTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMCKPKNPNGSCLNDTMNDEYLCAKLHLVDLAGSERAKRTGSDGMRFKEGVHINRGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDPMSSEMLKMRQKLEYLEAELCARAGCSSGEVQGLKERIVWLEAANEDLCRELHEHRSRCSLLEQSEKDAYDGGTCIVKTDGLKRTLPIIAADYPMNETAGDSREIEEVEKEWEHKLLQNSMDRELHELNKRLEQKEFEMKLFGVSDAEILKQRFGRKIMELEDEKRTVQRERDCLLAEVENLAANSDGQTQKLEDTHSQKLKTLEAQILDLKKKQENQVQLMKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLKKEGRKNEYEKHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKTSSRDTFVATNGNGTNGQSNEKSLQRWLDHELEVTVKEHEVRFEYEKQSQVRAALAEELAMLKHVSEFAAKGLSPPRGKNGFARASSMSPNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYMFNSVGDARCQLWEKDMEIREMKDQIKELVGLLRQSEMKRKEAEKEVKVREQAGTTTLATPVSGSSPNSLKQYTEDMKGPLSPMSVPIPRQLKYTPGVANNGLTRESAAFVDQGRKMKPIGQLSMKKLAMVGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIMRARPRSHALPHKM* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0985 1029 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 2 1027 - -
Psa5g0985 1029 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0985 1029 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0985 1029 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0985 1029 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0985 1029 Coils Coil 861 895 - -
Psa5g0985 1029 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Psa5g0985 1029 Gene3D Kinesin motor domain 2 391 IPR036961 -
Psa5g0985 1029 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 2 1027 - -
Psa5g0985 1029 MobiDBLite consensus disorder prediction 885 910 - -
Psa5g0985 1029 CDD KISc_KIF4 7 364 - -
Psa5g0985 1029 MobiDBLite consensus disorder prediction 150 171 - -
Psa5g0985 1029 Coils Coil 566 638 - -
Psa5g0985 1029 Coils Coil 516 557 - -
Psa5g0985 1029 Coils Coil 490 510 - -
Psa5g0985 1029 Coils Coil 671 691 - -
Psa5g0985 1029 Pfam Kinesin motor domain 15 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0985 1029 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0985 1029 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g0985 1029 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 393 IPR027417 -
Psa5g0985 1029 MobiDBLite consensus disorder prediction 895 910 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0985 Psa-Chr5 73910345 73923690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0985 9 387 Calmodulin-binding Proteins AT5G65930 33.681 1.24e-53 202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0985 5 73910345 73923690 Psa5g0985 5 73910345 73923690 ECH
Psa6g0340 6 10517146 10524980 Psa5g0985 5 73910345 73923690 PCT