Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0971 ATGGTCGGTTGGGCTATTGCCGTTCACGGCGGCGCTGGTGTTGATCCTAATCTCCCACCACAGCGTCAACAAGAAGCCATGCAACTTCTTACTCATTGTCTTAATCTTGGTATCTCCGCTCTCCGTTCCAATGCATCCGCTCTCGATGTAGTTGAACTCGTCGTGAGACAATTGGAAACGGATCCATTGTTCAATTCTGGACGTGGATCTGCGCTTACAGCAAAAGGAACTGTGGAGATGGAGGCTAGTATCATGGACGGTACCAAGAGAAGATGCGGTGCTGTATCTGGCGTTTCCACCGTGAAAAACCCTATCTCACTTGCTCGTCTTGTTATGGAGAAATCACCTCATTCATACCTTGCCTTTTCCGGCGCAGAAGAATTTGCCCGTCAACAGGGCGTGGAGGTTACCGAAAATGAATACTTCATCACTCCTGATAATGTTGGTATGCTGAAACTTGCAAAAGAAGCAAATACAATTATGTTTGACTATCGAATTCCGACGGCTGGACAATGTGCAGGAGTTGAAAGTCCAGTGAAGATGAACGGTCTGCCGATAAGTGCTTATGCACCGGAGACGGTCGGATGTGTGGTGGTGGACAGTGAAGGAAGGTGTGCTGCTGCCACATCGACTGGTGGTTTAATGAACAAAATGAGTGGTCGAATTGGTGATTCACCACTGATAGGTGCTGGAACATATGCATGTGAATTATGTGGAGTTTCTTGCACTGGCGAAGGTGAAGCTATCATACGTAGTACTCTAGCACGTGAAGTTGCAGCAGTAATGGAGTACAAAGGTTATAGGCTTCAAGAGGCGGTGGATTATGTGATAAAACATCGTCTTGATGAAGGGTTTGCTGGTCTTATTGCGGTGTCTAATAAGGGTGAAGTTGCTTTTGGTCATAATTGTAATGGAATGTTTAGGGGATGTGCTACTCAAAATGGGTTTATAGAGGTAGGAATCTGGGATTAG 972 0.4609 MVGWAIAVHGGAGVDPNLPPQRQQEAMQLLTHCLNLGISALRSNASALDVVELVVRQLETDPLFNSGRGSALTAKGTVEMEASIMDGTKRRCGAVSGVSTVKNPISLARLVMEKSPHSYLAFSGAEEFARQQGVEVTENEYFITPDNVGMLKLAKEANTIMFDYRIPTAGQCAGVESPVKMNGLPISAYAPETVGCVVVDSEGRCAAATSTGGLMNKMSGRIGDSPLIGAGTYACELCGVSCTGEGEAIIRSTLAREVAAVMEYKGYRLQEAVDYVIKHRLDEGFAGLIAVSNKGEVAFGHNCNGMFRGCATQNGFIEVGIWD* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0971 323 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 320 IPR029055 -
Psa5g0971 323 Gene3D (Glycosyl)asparaginase 193 323 - -
Psa5g0971 323 Pfam Asparaginase 4 322 IPR000246 GO:0016787
Psa5g0971 323 PANTHER BNAC01G35480D PROTEIN 1 323 - -
Psa5g0971 323 CDD Asparaginase_2 5 315 - -
Psa5g0971 323 PANTHER L-ASPARAGINASE 1 323 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0971 Psa-Chr5 73396362 73397638 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0971 6 257 Miscellaneous Gene Families AT4G00590 27.305 4.29e-16 76.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0971 5 73396362 73397638 Psa5g0971 5 73396362 73397638 ECH
Psa6g0355 6 11021574 11023912 Psa5g0971 5 73396362 73397638 PCT