Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa4g4027 | ATGACACTATTCTTCTTAATGAAATTCAAGAAATGTGTGATAGATATCATTATCGGGTGTGGTTATTTTGATATGATGCTGATTGACGTTTGTATGCCAAACATGGATTCTTATAACTTTGTTCAATATGTAACCCTACAACACAAAATACCTGTCATTGTGATTTCTTCTGATGCCACAGAAAGTTCTGTCCTAAAGTCTATAATTCATGGCGCATGTGATTATTGGGTTCAACCTCTGCATGAAAAACAATTCAAGACCATGTGGGGACACGTTGCCAGAAAAACTTTGATGGAGAATAAAGAAGATGAAGATCTTGGATTCTTGAATGCGCAACTCCATAAAGAACCTGAAGTTCTTGAAATCTTGGAGACTGAAAGTCATAAAGAACATCAAGATCTTGGATTCTTGAATGCGCAACTCCATAAAGAACCTGGACTTGTTGAAATCTTGGAGACTGAAAGTCATAAAGAAGATGAAGTTCTTGGATTCTTGAAAGCGCAAAGCTATAAAGAACATGAAGTTGTTGAAATCATGGAGGGTCCTCGGCATGAAAGAAAACGGGAGAGAGAAGATGATAATCCTCCAAAAGAAACAGAGGCAAAACCTAGAAAGATTCTCAAAATGATGGATGTTTCTGGTTTGACAACAGAACATGTTGCAAGTCATTTGCAGAAGTATAGGAATTATTTAAAGAAACCATGTTGTGGAAAAAGGTCAAAGAAAAGTAGATTTGATATTCCAGCTGAATCTGAACATGCTCAATCAATGTTACAACAGCATTCAACTGATGTTACTACTAATTATCATCAAGTTTCCGACATTGGCTACAATAATGAAACAGAAAAGCTTTCAACTGGTTTTGGCGATTATCAAGTCTCCGACATTATGAACGATTTTCCTGATCCATCTGACTTGCTCTTTGATTTAGATGATGAGTTAATATCATTATTATTTTGA | 960 | 0.3563 | MTLFFLMKFKKCVIDIIIGCGYFDMMLIDVCMPNMDSYNFVQYVTLQHKIPVIVISSDATESSVLKSIIHGACDYWVQPLHEKQFKTMWGHVARKTLMENKEDEDLGFLNAQLHKEPEVLEILETESHKEHQDLGFLNAQLHKEPGLVEILETESHKEDEVLGFLKAQSYKEHEVVEIMEGPRHERKREREDDNPPKETEAKPRKILKMMDVSGLTTEHVASHLQKYRNYLKKPCCGKRSKKSRFDIPAESEHAQSMLQQHSTDVTTNYHQVSDIGYNNETEKLSTGFGDYQVSDIMNDFPDPSDLLFDLDDELISLLF* | 320 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa4g4027 | 319 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR14 | 23 | 280 | - | - | |
Psa4g4027 | 319 | Pfam | Response regulator receiver domain | 23 | 86 | IPR001789 | GO:0000160 | |
Psa4g4027 | 319 | Gene3D | - | 10 | 102 | - | - | |
Psa4g4027 | 319 | SUPERFAMILY | CheY-like | 22 | 103 | IPR011006 | - | |
Psa4g4027 | 319 | MobiDBLite | consensus disorder prediction | 179 | 202 | - | - | |
Psa4g4027 | 319 | ProSiteProfiles | Response regulatory domain profile. | 1 | 93 | IPR001789 | GO:0000160 | |
Psa4g4027 | 319 | Gene3D | - | 152 | 233 | - | - | |
Psa4g4027 | 319 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 199 | 229 | IPR006447 | GO:0003677 | |
Psa4g4027 | 319 | SUPERFAMILY | Homeodomain-like | 199 | 233 | IPR009057 | - | |
Psa4g4027 | 319 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 23 | 280 | IPR045279 | GO:0009736 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa4g4027 | Psa-Chr4 | 347673115 | 347674518 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa4g4027 | 2 | 235 | Response Regulator Gene Family | AT3G62670 | 27.311 | 2.37e-16 | 77.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Psa4g4027 | Response_reg | 3.2e-07 | CL0304 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa4g4027 | - | K14491 | cam:101491966 | 138.272 |