Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3452 ATGGCGGACCACGGGACCGCCACCGCGAATGACGGCGAACCAGAACCACAACATAAGGAATTCCAAAACAAGAACAACGACGACAAGAAGAAAGATAAGAATTCAGATCCCGAGCATTTCTGCTGTCTACTTCAGCCTCTCACCCCCGACGCTGATCCCGAGTACATCGGCATTCGTCGCCTCCTCCTTCATCGGAAGGCCGAGGCCGGAGTTCTCCGCCGTAGGGATTGGAGATGCAATGGGAAAACTTATGTGGCATACCGGAATTACATTAGCAGGCCTAGGAACTGGGAAAGTTTGAAAGCTCCGAGCCTTCAAACTACTCCGGGAAACAGTGGCCGATGGATTTCATCTGGAAGTCCACCCTCCCGCTGGTCTGAGGTGGACAGCTGGAGTTCTGGGAGGGATGTCCAAATTGCAAACTCATTATCCAATCATAGAGCAAGTTTTGGCTCTGGCTCAAATGCAAGTGATTCTGATCGTCCACGGCACCGCGGGGTTGAACATGCCTATTCCTTTGTAGGAATGCATTGCATCTTTGACCAGTGCAAAGCCTCTGTTACGGTGTTAAAGTTTGGGCACATGAGTTCTGACTTACTTGCATACGGGGCATCAGATGGAACCATGACCGTGTGCAGTGTTTCGGAGAAACCTTCAGTCCTCACACAATTAAATGGCCACTCTAAAGATGTCACAGATTTCGATTTTACATCAAACAATCAATACATTGCTTCCACGTCGTTGGATAAAACTGTGAGAGTATGGGAGATAGAAAAAGGCATTTGCATACGGGTGATATATGGAGTTTCTTCACAACTGTGTATCCGTTTCCACCCTGTAAATAACAACTTCCTTTCCGTTGGTAATGCAAACAAAGAAATCAATGTGTTCAATTTTAGCACTGGAAGGATAATCAACAAGGCCATATTTGATGCTGAAGTTACCGCTATGGACCATGATCATACTGGTCATCTCATATTTTGTGGAGATGCACAGGGATGTATATACTCTGTAAATATGAACTCCCACACAGGTATATTATCCCGCTCTCATCGTCATCGAAGTAGCGGCAAACACAGATCTCCGGTCACAACAGTGCAATATAGGAGTTTCTCTCTTCTGGCTCGAGGACCTGTGTTGTTGACTTGTACTCAGGATGGAAATATATCTTTCTTCAGTGTGGCTTTAGAGATAAAAGGTTATTTAACTCTTCGTTGCTCGCTCAAGTTAACTCCTCGGATACACAAAATTCAAGCTTCTTTCTGCCCCCTTCTTTCTCTTGAAAAAGGAGAATTCATTGTTGCCGGAAGTGAGGACTCAAACGTCTATTTCTATGATCTTACAAAGCCAAAACATACATGTGTAAACAAGTTACAGGGTCATCGGTTTCCTGTAATGGGGATTGCTTGGAACCACGGAGAAAACTTTTTGGCTTCGTCTGATTTTTACGGAATAGTAATTGTTTGGAAGAGAGAAAGAACAAATCAGAACAAGAATACATAG 1503 0.4458 MADHGTATANDGEPEPQHKEFQNKNNDDKKKDKNSDPEHFCCLLQPLTPDADPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYVAYRNYISRPRNWESLKAPSLQTTPGNSGRWISSGSPPSRWSEVDSWSSGRDVQIANSLSNHRASFGSGSNASDSDRPRHRGVEHAYSFVGMHCIFDQCKASVTVLKFGHMSSDLLAYGASDGTMTVCSVSEKPSVLTQLNGHSKDVTDFDFTSNNQYIASTSLDKTVRVWEIEKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNANKEINVFNFSTGRIINKAIFDAEVTAMDHDHTGHLIFCGDAQGCIYSVNMNSHTGILSRSHRHRSSGKHRSPVTTVQYRSFSLLARGPVLLTCTQDGNISFFSVALEIKGYLTLRCSLKLTPRIHKIQASFCPLLSLEKGEFIVAGSEDSNVYFYDLTKPKHTCVNKLQGHRFPVMGIAWNHGENFLASSDFYGIVIVWKRERTNQNKNT* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3452 500 ProSiteProfiles Trp-Asp (WD) repeats profile. 458 499 IPR001680 GO:0005515
Psa4g3452 500 MobiDBLite consensus disorder prediction 1 35 - -
Psa4g3452 500 ProSiteProfiles Trp-Asp (WD) repeats profile. 224 265 IPR001680 GO:0005515
Psa4g3452 500 SMART WD40_4 173 213 IPR001680 GO:0005515
Psa4g3452 500 SMART WD40_4 217 256 IPR001680 GO:0005515
Psa4g3452 500 SMART WD40_4 451 490 IPR001680 GO:0005515
Psa4g3452 500 SMART WD40_4 259 298 IPR001680 GO:0005515
Psa4g3452 500 SMART WD40_4 410 446 IPR001680 GO:0005515
Psa4g3452 500 SMART WD40_4 349 393 IPR001680 GO:0005515
Psa4g3452 500 SMART WD40_4 301 339 IPR001680 GO:0005515
Psa4g3452 500 Gene3D - 419 499 IPR015943 GO:0005515
Psa4g3452 500 ProSitePatterns Trp-Asp (WD) repeats signature. 243 257 IPR019775 -
Psa4g3452 500 MobiDBLite consensus disorder prediction 13 35 - -
Psa4g3452 500 PANTHER WD REPEAT-CONTAINING PROTEIN 13 23 494 - -
Psa4g3452 500 Pfam WD domain, G-beta repeat 221 255 IPR001680 GO:0005515
Psa4g3452 500 Pfam WD domain, G-beta repeat 454 490 IPR001680 GO:0005515
Psa4g3452 500 SUPERFAMILY WD40 repeat-like 181 492 IPR036322 GO:0005515
Psa4g3452 500 Gene3D - 176 270 IPR015943 GO:0005515
Psa4g3452 500 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 224 260 - -
Psa4g3452 500 MobiDBLite consensus disorder prediction 102 121 - -
Psa4g3452 500 PANTHER WD REPEAT PROTEIN 26-RELATED 23 494 - -
Psa4g3452 500 Gene3D - 271 418 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3452 Psa-Chr4 293221137 293227748 Transposed