Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3410 ATGGCTACTCTCGTTGCTCCTGAGCATTTTACTCCAGAAGATGATGCTATTGTTCTTTATAAGGCAGTCAAGGGGTGGGGAACCGATGAGAGTGCTATCATAGCTATAATGGGACATAGAAATGCTACTCAAAGGCAACAAATAAGACAAATTTACGAAGACATGTACGAAGAAGATCTCATCAAACGTCTTGAATCAGAACTATCTGGTAATTTTGAGAAAGCAATGTATAGGTGGATATTGGAACCTTCAGATTGTTATGCTGTGTTGGCAAATGTAGCTCTTAAGAATGTTTCCAGAGATTATCATGTGATTGTTGAAATTGCAAGTGTTCTCAAACCTGAAGAGCTTGTGAATGTGAGGCGCGCCTATCAATATCGATTCCACCATTCTTTGGAAGAACATGTCGCTGCACATACCTCCTCCGGCTATTTTCGTCAGTTTTTGGTTGGACTGGTGAGCTCCTTTAGATATGATGGTGATTATATTCATCCAAGTTTGGCAAAATATGAAGCTGAAATTCTTCATGAGGCTATCCAAAACAAGAATGGTAACCTTGATGAAGTTATCAGGATCCTTACTACAAGGAGCAAGAAACAACTTAAGGCTACTTTCAACCGTTACAGAGATGATCATGGCTACTCTATTAGCAAGAGGCTGTTGAATGAAGAGTCTGATGACTTCCTTAAAGCTGCTCATGTTGCCATTCGTTGCATTGATGACCACAAGAAGTACTATGAAAAGGTTCTTCGGGGCGCGCTGAAAAGGATAGGAACCGATGAAGATGAACTAACCCGCGTGGTGGTCACGAGGGCTGAGAAGGACTTGAAGGACATCAAAGAGCTGTATTATCACAGAAACAGTGTTCGTCTCGAGGATGCAGTGGCCAGTGAGATCTCAGGAGACTACAAGAGGTTCCTTGTTACTCTTATAGGGAGAGAATACTAA 948 0.4167 MATLVAPEHFTPEDDAIVLYKAVKGWGTDESAIIAIMGHRNATQRQQIRQIYEDMYEEDLIKRLESELSGNFEKAMYRWILEPSDCYAVLANVALKNVSRDYHVIVEIASVLKPEELVNVRRAYQYRFHHSLEEHVAAHTSSGYFRQFLVGLVSSFRYDGDYIHPSLAKYEAEILHEAIQNKNGNLDEVIRILTTRSKKQLKATFNRYRDDHGYSISKRLLNEESDDFLKAAHVAIRCIDDHKKYYEKVLRGALKRIGTDEDELTRVVVTRAEKDLKDIKELYYHRNSVRLEDAVASEISGDYKRFLVTLIGREY* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3410 315 PANTHER ANNEXIN 8 314 - -
Psa4g3410 315 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Psa4g3410 315 ProSitePatterns Annexin repeat signature. 258 310 IPR018252 GO:0005509|GO:0005544
Psa4g3410 315 ProSiteProfiles Annexin repeat profile. 166 237 IPR018502 GO:0005509|GO:0005544
Psa4g3410 315 PRINTS Plant annexin signature 118 132 IPR009118 -
Psa4g3410 315 PRINTS Plant annexin signature 161 181 IPR009118 -
Psa4g3410 315 PRINTS Plant annexin signature 226 244 IPR009118 -
Psa4g3410 315 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Psa4g3410 315 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Psa4g3410 315 PRINTS Annexin family signature 91 112 IPR001464 GO:0005509|GO:0005544
Psa4g3410 315 PRINTS Annexin family signature 254 274 IPR001464 GO:0005509|GO:0005544
Psa4g3410 315 PRINTS Annexin family signature 298 311 IPR001464 GO:0005509|GO:0005544
Psa4g3410 315 ProSiteProfiles Annexin repeat profile. 241 312 IPR018502 GO:0005509|GO:0005544
Psa4g3410 315 Gene3D Annexin 243 313 IPR037104 GO:0005509|GO:0005544
Psa4g3410 315 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Psa4g3410 315 SUPERFAMILY Annexin 3 314 IPR037104 GO:0005509|GO:0005544
Psa4g3410 315 Gene3D Annexin 166 240 IPR037104 GO:0005509|GO:0005544
Psa4g3410 315 SMART annex3 101 152 IPR018502 GO:0005509|GO:0005544
Psa4g3410 315 SMART annex3 258 310 IPR018502 GO:0005509|GO:0005544
Psa4g3410 315 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Psa4g3410 315 SMART annex3 183 236 IPR018502 GO:0005509|GO:0005544
Psa4g3410 315 PANTHER ANNEXIN 8 314 - -
Psa4g3410 315 Gene3D Annexin 82 154 IPR037104 GO:0005509|GO:0005544
Psa4g3410 315 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Psa4g3410 315 Pfam Annexin 170 231 IPR018502 GO:0005509|GO:0005544
Psa4g3410 315 Pfam Annexin 248 310 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3410 Psa-Chr4 289163645 289165270 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4990 5 442537901 442540221 Psa4g3410 4 289163645 289165270 PCT