Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3375 ATGCCATTCAGAAACTGCGTTTCACGCCAACTTACCGATATGAGTTTTACATTGAAGTTTCATTATGGGGGTAGATTTGCTAGGGAATGTGTAATATATTATGTTGGGGGACATGAGCATGTAATAGAGATTGATCCTGATAAGTGGAGTTACTTTGAAGATATTGATATTGTGAAAGACATAACAATCTTGAACAGTGATTCTTCTTCCCTATGCTTCAATGGCGGCGTGAGCAGTGCCGTCTTCTTCTTCTTTGCACCAGGGTTTTCAACTTATTTTGAAATTGAATTCTGGAACTTGAAGCTATTGTTATTTCAGGCAATAACGGTATTGAGAAGCATGGGGCTATTTAGGACTGTTGTTAAAGAAGCTTGGGAGAAAACATTCTTATTTACAAAGTTCTTATGCTTTTTACATGTTACCGACAACTATCTGGTTGACCCTGTTAAGATCTACGGTCCTAGCATGCTTCCTGCAATCGATTTGAATCCAAGCATCTTTCTTGCTGAAAGGATAACACCTCGATCTGGTAAAGTTACTCACAGAGATATTGTAGTCTTCCGCTCACCTCAAAACCCTAGAAGAACTGTCACAAAGCGTGTGATTGGATTAGAGGGCGATACCATTACATACGTCTCTAATCCCGAAAACAACGATAACGATAAGCATGAGACAGCTGTGGTTCCAAAGGGCCACGTTTGGGTACAGGGGGATAACAAATATAATAGCACCGATTCTAGACATTTTGGTCCAATTCCTTATGGCCTTATTGAGAGTAAGATATTCTGGAAGGTATTTCCAGTTGAAGATTTTGGATCGGAAAACAATACCTTTGTGGACTCTGTTCAACCATTTTCTTTGCGAATTGGAGCTCACTTGCTAAAAAGTGGGCAGGCTCAAAATATTTTATGGCCAAAGGCAAACTATGGTGCAAGAATATGCCGTTCAGGCAGTGCACCATTCACCGGCAGAAGGCTTTGTCGCTCATGTAACTTTCGCATATTTTGTCTTTTAATTCCATTTCTAAAACAAGTGCTTGCTAGACATTGTTTTTCTTTGAAGGAACGTGGAATACTTCACACGAAAGGCCAACTTTTGCTTCAGGAGCCTATCAAGATGTCATGCCAACAATGGGACACAGTCTTTGTCCCAAAACATGAAAGGAGAAAACATGAGCGTCGTGCTGAACTTTAA 1194 0.402 MPFRNCVSRQLTDMSFTLKFHYGGRFARECVIYYVGGHEHVIEIDPDKWSYFEDIDIVKDITILNSDSSSLCFNGGVSSAVFFFFAPGFSTYFEIEFWNLKLLLFQAITVLRSMGLFRTVVKEAWEKTFLFTKFLCFLHVTDNYLVDPVKIYGPSMLPAIDLNPSIFLAERITPRSGKVTHRDIVVFRSPQNPRRTVTKRVIGLEGDTITYVSNPENNDNDKHETAVVPKGHVWVQGDNKYNSTDSRHFGPIPYGLIESKIFWKVFPVEDFGSENNTFVDSVQPFSLRIGAHLLKSGQAQNILWPKANYGARICRSGSAPFTGRRLCRSCNFRIFCLLIPFLKQVLARHCFSLKERGILHTKGQLLLQEPIKMSCQQWDTVFVPKHERRKHERRAEL* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3375 397 CDD S26_SPase_I 148 261 IPR019533 GO:0004252|GO:0006465
Psa4g3375 397 PRINTS Bacterial leader peptidase 1 (S26A) family signature 144 160 IPR000223 GO:0006508|GO:0008236|GO:0016020
Psa4g3375 397 PRINTS Bacterial leader peptidase 1 (S26A) family signature 197 209 IPR000223 GO:0006508|GO:0008236|GO:0016020
Psa4g3375 397 PRINTS Bacterial leader peptidase 1 (S26A) family signature 228 247 IPR000223 GO:0006508|GO:0008236|GO:0016020
Psa4g3375 397 SUPERFAMILY LexA/Signal peptidase 144 274 IPR036286 -
Psa4g3375 397 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 112 276 - -
Psa4g3375 397 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 112 276 - -
Psa4g3375 397 Gene3D Umud Fragment, subunit A 142 282 - -
Psa4g3375 397 ProSitePatterns Signal peptidases I signature 3. 233 246 IPR019758 GO:0004252|GO:0016021
Psa4g3375 397 TIGRFAM sigpep_I_bact: signal peptidase I 132 214 IPR000223 GO:0006508|GO:0008236|GO:0016020
Psa4g3375 397 Pfam Signal peptidase, peptidase S26 133 211 IPR019533 GO:0004252|GO:0006465
Psa4g3375 397 Pfam Signal peptidase, peptidase S26 222 262 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3375 Psa-Chr4 287178276 287185008 Dispersed/Tandem