Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3343 ATGGCCACTGAAAAATCAAATTCCTATGAGAATTTTAAACACTACATTGCTATGATATGCTTACAATTTGGTTATGCTGGTATGAATATTATCACTAAGGTTTCCCTTAACCAAGGCATGAGTCACTACGTCCTCGTCGTTTATCGCCACGCTTTCGCAACCGCTTCTATAGCTCCATTTGCACTTATGTTTGAAAGGAAAGGTCAACCTAAGATAACATTCAGAATTTTCATCCAAATTTTCATCCTAGCTCTTCTTGGGCCAGTGATTGATCAAAATTTCTATTATGCTGGGTTGAAACTCACATCTCCAACTTTCTCTTGCGCAATGAGCAACGTGCTTCCAGCCATGACCTTTGTCATGGCAGTTTTATGCAGGATGGAGAAGATAAACATAAAGCAAGTTCGATGCCAAGCAAAGATATTCGGAACGATAATGACAGTGGCAGGTGCAATGCTAATGACATTATACAAAGGACCAATAGTGGAGATGATATGGGCCAAACATAAACATCCTCAAAATGAAACACATGAAACAACCACCACAGGTTCTTCAGAAAGAGATTGGATATTAGGTTGCACTTTCCTTATCATTGCCACTTTTGCTTGGGCTTGTCTCTTTGTTTTGCAAGCAAAAGTTATTGAAACGTATAAGCATCATCAACTGAGTCTCACTTCACTTATGTGTTTCATTGGTACTCTTCAAGCTATTGCTGTTACCTTTGTGGCTGAGCATAATCTTTCTGTATGGAGGATTGGTTGGGATATGAGTTTACTTGCTGCTGCCTATGCTGGAATTGTGACCTCAAGCTTAGCATACTTTGTGCAAGGGCTGGTGATTAGGAAGAAAGGGCCTGTATTTGCAACTGCCTTTAGTCCACTTATGATGATCATTGTTGCAGTCATGGGATCCTTTATCCTTGCAGAACAGATATATTTTGGAGGTGTGATTGGGGCCATCTTGATTGTTATAGGTTTATACTCTGTTCTATGGGGAAAGCATAAGGAAGAAACAGAAAGAAAAATAGAAAATGATATTCCTTTGCCTATAAAAGGTGTTCAAATTGGTGGAACTTCGGGGCCAGTGATTGCTGACATAGATCAAGTGAAAAATGGTCAAGTTGGAGATACTAACAACATGCTTTCGTCACTTGCAATAACCATGCCTACTAAAGTGCCTGCTACTAATAATAATGTTAACCAACAATAA 1209 0.3921 MATEKSNSYENFKHYIAMICLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATASIAPFALMFERKGQPKITFRIFIQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNVLPAMTFVMAVLCRMEKINIKQVRCQAKIFGTIMTVAGAMLMTLYKGPIVEMIWAKHKHPQNETHETTTTGSSERDWILGCTFLIIATFAWACLFVLQAKVIETYKHHQLSLTSLMCFIGTLQAIAVTFVAEHNLSVWRIGWDMSLLAAAYAGIVTSSLAYFVQGLVIRKKGPVFATAFSPLMMIIVAVMGSFILAEQIYFGGVIGAILIVIGLYSVLWGKHKEETERKIENDIPLPIKGVQIGGTSGPVIADIDQVKNGQVGDTNNMLSSLAITMPTKVPATNNNVNQQ* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3343 402 Pfam EamA-like transporter family 15 155 IPR000620 GO:0016020|GO:0016021
Psa4g3343 402 Pfam EamA-like transporter family 191 330 IPR000620 GO:0016020|GO:0016021
Psa4g3343 402 PANTHER WAT1-RELATED PROTEIN 9 369 - -
Psa4g3343 402 PANTHER WAT1-RELATED PROTEIN 9 369 IPR030184 GO:0016021|GO:0022857
Psa4g3343 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
Psa4g3343 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3343 Psa-Chr4 284560434 284565256 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3343 1 389 Nodulin-like Gene Family AT5G07050 62.408 1.06e-178 501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3343 4 284560434 284565256 Psa4g3343 4 284560434 284565256 ECH
Psa5g5140 5 449166793 449170958 Psa4g3343 4 284560434 284565256 PCT