Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3342 ATGGCATCCTCACCTCCTTCATTCTCTCCCTCTCGCACTACTTGTGCTTCTCTCCTCCGTCAATTGCAGATGATATGGGATGAGATTGGAGAGAGTGACAATGATAGAGACAATATGCTGCTTCAACTGGAGCAAGAGTGCCTTGACATTTATCACAGAAAGGTTGAGGAAACCAGAAAGCACAAAGCTGACTTGAATAAGTTACTGGCTGATGCTGAATCTGAAGTCAGCAATATTGCTTCTTCTTTTGGGGATTGCGTGTCGTTCTCTCGGGGAAAGGGCACTCTGAAGCAGCAACTAGCTAACATCAGACCTGTCTTAGAGGACTTGAGGTCAAAGAAGGATGAGAGAGTCAAGGAATTTTTAAAAATAAAGTCCCAAATTTCTCAGATATGTGCTGAAATAGCAGGCTCTGGACAGTCCAAAGATGTCACGGATCAAGATCTTGATCAGTGTGATCTAACAACAAAGAAATTGGGGGAACTCAAATTGCATCTCGATGAACTTCAAAATGAAAAGATATTGCGCCAGCTGAAAGTGAGGAATCACATCAGTATTATTAGCGAGCTTTCAGCAGTAATGTCAGTTGATTTTAAGAAGACTTTAAATGAAGTCCACCCAAGCTTGAGTGATTCATCAAATGGTGCACCGCTAAGCATTAGCAATGACACTCTTGCTACATTAACTGGGGTTGTTCATTCATTAAAGCAGGAAAAGCAACAAAGGCTACAAAAGGTACAAGAACATACCAAGTTTTTGGTAGAGTTATGGGATCTCATGGAGATGCCAATTGATGAGCAAAAAGCCTTTAGCCATGTTACTAGATTAATTTCGGCATCGGTTGATGAAGTGTCAATCCGAGGATGCCTTTCTGCTGATGTCATTAAGCAGGTTGAGGTTGAAGTTCAGCGCTTAAATGTTTTGAAAGCCAGTAAGATGAAGGAGTTAGTGTTTAAAAGACAGAATGAACTTGAAGAAATTTACAGAGGAGTTCATATGGATGTAGATAGTGAAGCTGCTAGACAGATTCTGACCAGCCGCATAGAATCTGGTAATATTGATATGTCTGAATTGCTTCAAAGCATGGATGATCAAATCAAAATGGCCAAAGAGCAAGCTCTAAGCAGAAGAGATATCTTAGATAGGGTGGAGAAGTGGAAATTTGCATCCGAGGAGGAAAAGTGGTTAGATGAATATGAAAAGGATGAAAATCGATATAGTGCAGTAAGAGGAGCACATAAAAATTTGAAGCGTGCAGAGAAAGCACGGATTCTTGTCAGCAAGATTCAATCTATGGTAGAGAATTTGACTGCAAAAGTGAAGGCATGGGAGACGGAAAAAGGAATTCCTTTCTTATATGAAAAGGTTCCATTGCTGCAAAGCTTGGACGAATACAATGTACAGCGGCAATTGAGAGAAGAAGAGAAGCGGAAATCTCGGGTATGA 1446 0.4073 MASSPPSFSPSRTTCASLLRQLQMIWDEIGESDNDRDNMLLQLEQECLDIYHRKVEETRKHKADLNKLLADAESEVSNIASSFGDCVSFSRGKGTLKQQLANIRPVLEDLRSKKDERVKEFLKIKSQISQICAEIAGSGQSKDVTDQDLDQCDLTTKKLGELKLHLDELQNEKILRQLKVRNHISIISELSAVMSVDFKKTLNEVHPSLSDSSNGAPLSISNDTLATLTGVVHSLKQEKQQRLQKVQEHTKFLVELWDLMEMPIDEQKAFSHVTRLISASVDEVSIRGCLSADVIKQVEVEVQRLNVLKASKMKELVFKRQNELEEIYRGVHMDVDSEAARQILTSRIESGNIDMSELLQSMDDQIKMAKEQALSRRDILDRVEKWKFASEEEKWLDEYEKDENRYSAVRGAHKNLKRAEKARILVSKIQSMVENLTAKVKAWETEKGIPFLYEKVPLLQSLDEYNVQRQLREEEKRKSRV* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3342 481 Coils Coil 55 75 - -
Psa4g3342 481 Gene3D - 367 481 - -
Psa4g3342 481 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 5 12 480 - -
Psa4g3342 481 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 12 480 IPR007145 GO:0000226|GO:0008017
Psa4g3342 481 Coils Coil 152 172 - -
Psa4g3342 481 Pfam Microtubule associated protein (MAP65/ASE1 family) 17 479 - -
Psa4g3342 481 Coils Coil 426 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3342 Psa-Chr4 284548458 284555773 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3342 13 465 EF-hand Containing Proteins AT5G62250 38.412 4.53e-91 286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3342 4 284548458 284555773 Psa4g3342 4 284548458 284555773 ECH