Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3336 ATGGAGGAGGAGCATATGAAAGTGCCATTGTTGGAGAAGAAGCAATACCATGAGGGTTGTCCTGGTTGTAAGGTGGAACAAACCAAAGAGCTAAACCATGGTGTATCCATTATAAATCTTTTGATCATTTGGATGGTTGTGTTATCTGCTACACTTCCTGCATCATCACTTTTTCCATTCCTTTATTTCATGGTAAGAGATTTCAATGTTGCAAAAGAAGAAGCTGATATTAGTTATTATGCTGGTTATGTGGGATCTGCATACATGTTTGGAAGAGCTTTAACATCTGTATCATGGGGAATGATATCTGATCGATACGGTCGAAAACCTGTTATAATTATGGGGGTCATCGCAGTAATCATACTCAACACACTATTCGGCCTCAGTACGAGTTTTTGGATGGCTATTATCACGCGATTTCTTCTCGGAAGTTTAAATGGCATACTCGGACCAGTGAAGGCTTATGCTAGTGAACTTTTTCGAGAAGAGCACCAAGCTATAGGACTTTCGACTGTTAGTGCAGCTTGGGGCATAGGTTTAATCATTGGCCCCGCACTGGGTGGATATTTGGCTCAGCCAGCAGAAAAATACCCTCAAATATTTTCAAAGGGTTCCTTTTGTGACAAGTTTCCATACTTCTTACCATGCTTTATAATATCAGGATTCGCACTTACCGTAGCCATTGTCTGCATCTGGATTCCGGAAACACTTCACAATCATAGTGGTAACGAGTCTAGAGACGATGCTGAAACGGTAGAAAATGGAAGCATAAGAGTAGTTAAAGAAAAGACAGTCCAAAAGAATGAAAACCTCTTCATGAATTGGCCTTTGATGTCATCTATCATTGTGTACTGTGTCTTCTCACTTCATGATGTTGCTTATCAAGAGGTTTTCTCATTATGGGCTGTTAGTCCTCGGAGGCTAGGGGGTTTGAACTTTACAACAGATGATGTTGGCAATGTTCTTTCAATTTCAGGACTTGCACTTGTGATCTACCAACTTTTCATATACCCGTCCGTGGAAAAAGCTTGTGGACCTATCGGATTTGCCCGCATCACAGGGATTTTTTCAATACCACTTTTGCAAAGTTACCCCTTCATAGCATTGTTGTCGGGCACAGCCTTATACGTAGTCATTAGTATTGCTTCTGTCTTCAAGAATGTTATGTCTGTGACGATTACAACGGGCTTATTCCTTATACAAAACCGAGTAGTGGAACAACACCAAAGAGGAGCCGCTAATGGCATATCTATGACAGGCATGTCTTTATTCAAAGCTATTGGCCCTGCAGCAGGCGGTACAATATTAACTTGGTCACAAAAGCGTATGGATGCTTCTTTCCTCCCAGGCACTCAAATGGTATTTTTCTTCCTGAATTTGGTTGAAGGGCTTGGAATAGTTTTGATGTTTAAGCCATTCCTTGGTGAAAAGAAGAAAACAAACTCAGATATGTTACATTGA 1461 0.4079 MEEEHMKVPLLEKKQYHEGCPGCKVEQTKELNHGVSIINLLIIWMVVLSATLPASSLFPFLYFMVRDFNVAKEEADISYYAGYVGSAYMFGRALTSVSWGMISDRYGRKPVIIMGVIAVIILNTLFGLSTSFWMAIITRFLLGSLNGILGPVKAYASELFREEHQAIGLSTVSAAWGIGLIIGPALGGYLAQPAEKYPQIFSKGSFCDKFPYFLPCFIISGFALTVAIVCIWIPETLHNHSGNESRDDAETVENGSIRVVKEKTVQKNENLFMNWPLMSSIIVYCVFSLHDVAYQEVFSLWAVSPRRLGGLNFTTDDVGNVLSISGLALVIYQLFIYPSVEKACGPIGFARITGIFSIPLLQSYPFIALLSGTALYVVISIASVFKNVMSVTITTGLFLIQNRVVEQHQRGAANGISMTGMSLFKAIGPAAGGTILTWSQKRMDASFLPGTQMVFFFLNLVEGLGIVLMFKPFLGEKKKTNSDMLH* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3336 486 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 1 484 - -
Psa4g3336 486 SUPERFAMILY MFS general substrate transporter 39 478 IPR036259 -
Psa4g3336 486 PRINTS Tetracycline resistance protein signature 112 136 IPR001958 GO:0022857
Psa4g3336 486 PRINTS Tetracycline resistance protein signature 169 191 IPR001958 GO:0022857
Psa4g3336 486 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 1 484 - -
Psa4g3336 486 Gene3D MFS general substrate transporter like domains 38 467 IPR036259 -
Psa4g3336 486 Pfam Major Facilitator Superfamily 43 288 IPR011701 GO:0022857|GO:0055085
Psa4g3336 486 CDD MFS_SLC46_TetA_like 43 471 - -
Psa4g3336 486 ProSiteProfiles Major facilitator superfamily (MFS) profile. 39 477 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3336 Psa-Chr4 284055599 284059617 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3336 4 284055599 284059617 Psa4g3336 4 284055599 284059617 ECH