Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3320 ATGTCATCCTCATGCACCAAGAGATTTTTCAAGAGGTTTTGGGTCGACGAATTCCATACCGGAGCTTTTCCGTATGGCAACTTTCTGTCTACTGATATCTTGCCGTCTCTCGGAGCAAGAATCAACCAAGAAACAAGATTAAGAAGATACATAATCTCTCCTTTCAATCCAAAGCATAGGGCTTGGGAGATGTGGTTGATACTTCTGGTGATTTACTCTGCATGGATGTGCCCCTTTCATTTCGCTTTTCTACCTGATAAGCATCCTACACTGTTGATCGTCGATAACATTATCAATGCTTTCTTTGCAATCGACATAGTCATGACATTCTTTGTTGCGTATCTTGATGATCATTCTTACCTTCTTGTCGATGATCCAAAGAAAATTGCAGTCCGGTACGTATGTACTTGGTTTATCTTCGATGTTTCTTCAACCGCGCCTTTGCAATATATTATCTCCTTATTCACTAAAAATAGCGACGCGATTGGGTTCAAACTCCTTAATATGCTTCGGTTATGGCGTCTCAGACGAGTCAGTTCTCTTTTCGCAAGGCTTGAGAAAGATATTCGCTTCAATTACTTTTGGACTAGGTGTATAAAGCTCATTGCTGTGACCTTGTTTGTGCTACACTTTGCTGGATGCTTTATTTATTTTATTGCAGATAAGCACAGTGATCCAAATGATACATGGATTGGTTCTGTGTTTCCAAAATTTAAAGAAACATCTATTTGGGATAGATATGTGACATCAATTTATTGGGCTATTGTCACAATGACTACAACTGGCTATGTGGACAAGCCATACCAGAAATACATGTTGTTCAACTTGGGATTACAAGCTTATATAATTGGAAATATTACAAATCTTGTTGTTCAGTGGACAAGCCATACCAGAACTTTTAGAGATACAGTGAGAGCAGCTTCTGAATTTGTAACGAAAAATCATCTGCCTCATGATACACAAGATCAAATACTATCACATTTATCTTTGAAGTTCAAAACAGATGGATTAAAGCAACAAGAAACAATAAACAGCATGCCAAAAGCAATTCGTGCCACCATTTCACACCATCTATTTTATCCCGTCGTGCAGAAATCATATCTCTTCCAACAAGTTTCACATGATTTTCTTTTTCAACTGGTTCCAGAAATGGAAGCTGTGTATTTTCCACCAAAAGAATATGTTATACTGCAAAATGAGTCTCCAACCGATCTTTACATGCTGGTGTCAGGAGCAGTGGAGTTCATTCACACTGTTGACAGTTATGATCAAGTTTCGATGAAGGCAAATGCAGGAGATACTTTTGGAGAGATTGGAGTTCTACACAACCGACCGCAACCTTTCGGCGTTAGGACGAGAGAGCTTTCGCAAATATTGAAACTTAGCCGAAGCTCATTGATGAATGTCATACATGCAAATCCCGAAGCAGCGCCAATTATAATGATGAATCTCTTTATGATGTTAAAAGCAGAAAAAGATTTTAAGTATCCACCTATATGTCCTAGATTGGCACTTCATGACATGCTTCATGGGAACAACACAAGTGGAAATCCATGTTTTGCATGTACAAATGTTTCGCCCGGGGAAGCTATGTTGTACGACATGTTTCCAAACATGGATGACAATCACCAAGAAAAAGAAGCGAATGAAAAGAGACTAAATCGCGTTAGATGGAAACAGAAATCTCAAGAAGACGAAGAACGAAACAAGATTCATGAATATGGAACAAGTAACCATTCAATCTCAAGTAAACAAGCAAACAATAAGAGAGTAACCATCCACTTTCTTGACAAACACGGAACTGCCTTACCGCCACAAGGTGGAAAGCTGATTATTCTACCGGATTCAATCGAAGAGCTTCTCGAAATTGCAGGAAAAAAGTTTGGAATGCCAAAGCCTAACATAATCAAAAGTGCAGAAGATGCTGAGATAGATGATTTATGTGTCATTCGAGACGAAGATCAACTGTTTTTTCTTTGCTACGACAAACAAGTTTTGAGCTAA 2004 0.3862 MSSSCTKRFFKRFWVDEFHTGAFPYGNFLSTDILPSLGARINQETRLRRYIISPFNPKHRAWEMWLILLVIYSAWMCPFHFAFLPDKHPTLLIVDNIINAFFAIDIVMTFFVAYLDDHSYLLVDDPKKIAVRYVCTWFIFDVSSTAPLQYIISLFTKNSDAIGFKLLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCIKLIAVTLFVLHFAGCFIYFIADKHSDPNDTWIGSVFPKFKETSIWDRYVTSIYWAIVTMTTTGYVDKPYQKYMLFNLGLQAYIIGNITNLVVQWTSHTRTFRDTVRAASEFVTKNHLPHDTQDQILSHLSLKFKTDGLKQQETINSMPKAIRATISHHLFYPVVQKSYLFQQVSHDFLFQLVPEMEAVYFPPKEYVILQNESPTDLYMLVSGAVEFIHTVDSYDQVSMKANAGDTFGEIGVLHNRPQPFGVRTRELSQILKLSRSSLMNVIHANPEAAPIIMMNLFMMLKAEKDFKYPPICPRLALHDMLHGNNTSGNPCFACTNVSPGEAMLYDMFPNMDDNHQEKEANEKRLNRVRWKQKSQEDEERNKIHEYGTSNHSISSKQANNKRVTIHFLDKHGTALPPQGGKLIILPDSIEELLEIAGKKFGMPKPNIIKSAEDAEIDDLCVIRDEDQLFFLCYDKQVLS* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3320 667 Gene3D - 60 291 - -
Psa4g3320 667 PANTHER POTASSIUM CHANNEL AKT1 1 659 IPR045319 GO:0005249|GO:0006813
Psa4g3320 667 Gene3D Jelly Rolls 357 488 IPR014710 -
Psa4g3320 667 Gene3D Helix hairpin bin 292 356 - -
Psa4g3320 667 Pfam Ion transport protein 59 296 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Psa4g3320 667 MobiDBLite consensus disorder prediction 557 584 - -
Psa4g3320 667 ProSiteProfiles cAMP/cGMP binding motif profile. 368 475 IPR000595 -
Psa4g3320 667 SUPERFAMILY cAMP-binding domain-like 295 485 IPR018490 -
Psa4g3320 667 MobiDBLite consensus disorder prediction 557 574 - -
Psa4g3320 667 PANTHER POTASSIUM CHANNEL KAT1 1 659 - -
Psa4g3320 667 CDD CAP_ED 368 477 IPR000595 -
Psa4g3320 667 Pfam Cyclic nucleotide-binding domain 387 471 IPR000595 -
Psa4g3320 667 Pfam KHA, dimerisation domain of potassium ion channel 589 658 IPR021789 -
Psa4g3320 667 ProSiteProfiles KHA domain profile. 590 667 IPR021789 -
Psa4g3320 667 SUPERFAMILY Voltage-gated potassium channels 54 291 - -
Psa4g3320 667 SMART cnmp_10 368 485 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3320 Psa-Chr4 281330621 281337540 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3320 1 658 Ion Channels AT5G46240 54.467 0.0 749