Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3312 ATGGGTGTGGTGATAATAGACGGTACCACCGTAACAGACTTCATAGCCGACGACGAGCGTTTCACAGACAGCGTCAACGAACAGTTTTCATCTCTCGATCTCAACAACGACGGCGTTTTATCACGCGCCGAGCTTCGCACAGCCTTCGAATCGATGAGACTGATCGAGGCACACTTCGGCATCGACGTATCTACTCCGCCGGAGCAACTCACGCGCCTTTACGACTCCGTGTTCGACAGTTTTGACGGTGACGGAAGTGGCACTGTCGATCGTGACGAGTTTAAATCCGAGATGAAGAAGATCATGCTCGCGATCGCTGATGGATTGGGATCTTCGCCTATTCAGATGGTTCTGGAAGATGATTCGCAGAGTCTTCTTCAGAAAGCGGCGGATCTTGAAGCTTCTAAGTACGCTGCTGCCGTTTGA 426 0.5141 MGVVIIDGTTVTDFIADDERFTDSVNEQFSSLDLNNDGVLSRAELRTAFESMRLIEAHFGIDVSTPPEQLTRLYDSVFDSFDGDGSGTVDRDEFKSEMKKIMLAIADGLGSSPIQMVLEDDSQSLLQKAADLEASKYAAAV* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3312 141 Pfam EF-hand domain pair 26 98 IPR002048 GO:0005509
Psa4g3312 141 ProSitePatterns EF-hand calcium-binding domain. 82 94 IPR018247 -
Psa4g3312 141 ProSiteProfiles EF-hand calcium-binding domain profile. 20 55 IPR002048 GO:0005509
Psa4g3312 141 CDD EFh 29 99 IPR002048 GO:0005509
Psa4g3312 141 Gene3D - 16 52 - -
Psa4g3312 141 SMART efh_1 73 101 IPR002048 GO:0005509
Psa4g3312 141 SMART efh_1 24 52 IPR002048 GO:0005509
Psa4g3312 141 ProSitePatterns EF-hand calcium-binding domain. 33 45 IPR018247 -
Psa4g3312 141 Gene3D - 53 129 - -
Psa4g3312 141 SUPERFAMILY EF-hand 13 103 IPR011992 -
Psa4g3312 141 ProSiteProfiles EF-hand calcium-binding domain profile. 69 104 IPR002048 GO:0005509
Psa4g3312 141 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN 1 138 - -
Psa4g3312 141 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 138 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3312 1 140 EF-hand Containing Proteins AT2G44310 67.143 4.61e-66 195