Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3311 ATGCTTTACAACAACACAAACTCCATGGTTCATTTCTTTCTACTAGCATCAATGATAATTGGAATTGGAATGTCAGATTCATCGAAAGATAAACAAGAATGCACACCCCAATTGGCAAGTCTAGCAACATGTCTACCTTATGTTGAAGGCGAAGGAAAAACTCCAGCGACAGATTGTTGTGATGGTCTCAAGACACTGCTTAAAACAAACGAAAAATGTTTGTGTTTAATTATCAAAGATCGTAATGATCCTGATTTGGGTGGTATTATAATTAATGTCACTTTGGCTTTGAATCTTCCTAAAGTTTGTAATGCCCCTGCCAATGTCTCTAGATGTCCCGAGCTGCTGCACATGGATCCAAAATCAAGTGAGGCTCAAGTTTTTTATCAATTAAAGAATGGCTCCACAAATATTGGCCCTAGTGTTGCACCTAGTTCTTCACATGGAGCAAACACTCATGCAAACAGTACTACAGAAAAGAGTGATGCATTCAGCAAAGAGAAGAGGTTGTTTGGGTTGGATGCTTTGGCTATGGTGATTTTGGTTTGGTTTTTAATGGGTTCTAGAGATGGAAATATTTTTATTTAG 588 0.3793 MLYNNTNSMVHFFLLASMIIGIGMSDSSKDKQECTPQLASLATCLPYVEGEGKTPATDCCDGLKTLLKTNEKCLCLIIKDRNDPDLGGIIINVTLALNLPKVCNAPANVSRCPELLHMDPKSSEAQVFYQLKNGSTNIGPSVAPSSSHGANTHANSTTEKSDAFSKEKRLFGLDALAMVILVWFLMGSRDGNIFI* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3311 195 PANTHER PROTEIN YLS3-LIKE ISOFORM X1 15 186 - -
Psa4g3311 195 MobiDBLite consensus disorder prediction 140 161 - -
Psa4g3311 195 Pfam Probable lipid transfer 16 112 IPR016140 -
Psa4g3311 195 Gene3D - 31 110 IPR036312 -
Psa4g3311 195 MobiDBLite consensus disorder prediction 140 159 - -
Psa4g3311 195 CDD AAI_LTSS 41 104 - -
Psa4g3311 195 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 15 186 IPR043325 -
Psa4g3311 195 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 113 IPR036312 -
Psa4g3311 195 SMART aai_6 34 112 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3311 Psa-Chr4 280986027 280987401 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3311 26 186 Acyl Lipid Metabolism Gene Families AT2G44300 47.159 6.46e-53 166