Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3290 ATGGTTACTATCAAGGGAAAATCGCGACTTGGTTCAACGCGACCCTCTGTAGGTGGACAGTCGCGTCCAAGTGTGGGTGCCAAGAATATCAAGTTTTTTTCGGATAATGATCGGATTAAAGTTGGTGATGCCTCCAAGACATCTGCAAAAGAAGTTGCTGCAGCTTCAAGAAAGAGTGCTATAGCAGTTGACAAAGGTGTGGAGAAAAGTAGTGGAACATATGACACTTCAAATATAAACTCGAGAAAAGCATTGACTGATGTTACCAATGATCAAGGAAACTCTACGGCAGCGGCTAAGCGTAGTAATATCTTCAAGGTTTCAGCAGGTTCAACCACTAAAAAAGTGGGTATCTCTTTGAGGAAATCCTTCACGGTTAAAGAGCATAGAAATACTAGTCATAGTGGAGTTCAATTAGATGCTCCCGGTAGAGGTTTAAGGGTTCCTTTAGGTGACCAGAAGAATAGTTCAAATGGAGGTCAGTCTGTTGCCTCAAAGGATAGGTTTGGAAGGAAGCCTATATTACCTACAACTACAAGAACTTCAAGGAAGTCTCTCCCAGTTTCTTTAGGTGATCAAAAGAATAGCTCAAATGAAGGTCAATCAGTTTCGACAAAAGATAGGTTTGCAAGGAAGCATATGTTACCTACAACTACAAGCACTTCAAGGAAGTCTCTGCCAGTTCCTAGGAGGGTAAACAGGGTAGATAAGAATAACACAAAGGAAAATGCTGGAAGTTCTGAATCATCCAATAGCCAAAATGGTCTACCAAGTAAGCTGACAACAGGCAGAAGGGTTAGTTCGCAACTAACCAATGCAAGGAGCCATATGAAGACTCGAGTTAGTGACGGCTTTGTTAGAACGGTTACAAGTAATGCTAACCAAGCATCTTCAAGGAATTCCACCAAGCCTATTGTGAAGACCACATTCAAGGCTTGTGCATCTCAGAGGACTCTAAAATCCAAATCCATAGCAGATCAGAACAAATCAAAATCAACTACTGCCGTAGCATCCAAGGATGAAGAAAAGATTTCTTCTTCACTTCCTAAGGATGAGGAAAACGTTTCTTCTTCACTTCCTAAGGATGAGAAAAACGTTTCTTCGTCTCTTCCTAAAGACGAGGAAGGCGTTTCTTTCTCTCTTCCTAAGAATAGTTCAGTGGTTCAACCAACTGATGGAGATAGTAGTCTAAAAACAGATTTGTCAGAGTTGATTCCAAGAAAAAGTTCCAGTCGTCGGAAATCTTATACAACTTCACTAATTGAAAAATCTAAGATTCTCAAGGAAAATGGTGAAGTCAGGAAGCAAGATAGCCTACCAAATATAGATGATAAATGTAATCATCTAGAAGTTTCTGAATATATTGATGATATATATCATTACTATTGGGTCACCGAGGCACATAGTCAAGCTCTGTCAAATTACATGTCGATTCAGACAGAGATTACTCCTCATATGCGGGGAGTATTGGTCAACTGGCTGATTGAGGTACACTTCAAATATGATTTGATGCCGGAAACACTATATCTCACAGTGACATTGTTGGATCAATATCTTTCTCAAGTGACTGTAAAAAGGAGTGACATGCAGTTAGTTGGTCTTACAGCACTTTTACTGGCTTCGAAGTACGAAGACTTTTGGCATCCAAGGGTAAAGGATTTGATTAGCATCTCGGCCGAAACTTATACTAGAGATCAAATGCTTGGAATGGAAAAACTTATTCTTAGAAAATTGAAGTTCCGTCTTAATGCTCCCACTCCTTACGTTTTTATGGTTAGGTTTATCAAGGCCGCACAATCAAATATGAAGCTTGAACACATGGCATTCTTTCTCATTGACCTGTGCTTGGTTGAATATGAAGCTTTAGCATTCAAGCCTTCGTTACTATGTGCATCAGCTCTCTATCTTGCACGTTGTACGCTGCAAATAACCCCATCATGGACACCACTACTTCAAAAGCATGCGCGTTATGACGTTTCACAGATCAGGGATTGTGCTGATATGATGTTGAAATTCCATAAAGCTGCTGGGAAGGGAAAGTTGACAGTGGCTTATGAAAAATATTCCAGAAAGGAACTCAGTGCTGTAGCAGGAGTGAAACCGTTGGATAGACTTCCCCATTAA 2124 0.4035 MVTIKGKSRLGSTRPSVGGQSRPSVGAKNIKFFSDNDRIKVGDASKTSAKEVAAASRKSAIAVDKGVEKSSGTYDTSNINSRKALTDVTNDQGNSTAAAKRSNIFKVSAGSTTKKVGISLRKSFTVKEHRNTSHSGVQLDAPGRGLRVPLGDQKNSSNGGQSVASKDRFGRKPILPTTTRTSRKSLPVSLGDQKNSSNEGQSVSTKDRFARKHMLPTTTSTSRKSLPVPRRVNRVDKNNTKENAGSSESSNSQNGLPSKLTTGRRVSSQLTNARSHMKTRVSDGFVRTVTSNANQASSRNSTKPIVKTTFKACASQRTLKSKSIADQNKSKSTTAVASKDEEKISSSLPKDEENVSSSLPKDEKNVSSSLPKDEEGVSFSLPKNSSVVQPTDGDSSLKTDLSELIPRKSSSRRKSYTTSLIEKSKILKENGEVRKQDSLPNIDDKCNHLEVSEYIDDIYHYYWVTEAHSQALSNYMSIQTEITPHMRGVLVNWLIEVHFKYDLMPETLYLTVTLLDQYLSQVTVKRSDMQLVGLTALLLASKYEDFWHPRVKDLISISAETYTRDQMLGMEKLILRKLKFRLNAPTPYVFMVRFIKAAQSNMKLEHMAFFLIDLCLVEYEALAFKPSLLCASALYLARCTLQITPSWTPLLQKHARYDVSQIRDCADMMLKFHKAAGKGKLTVAYEKYSRKELSAVAGVKPLDRLPH* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3290 707 MobiDBLite consensus disorder prediction 239 303 - -
Psa4g3290 707 Pfam Cyclin, C-terminal domain 585 697 IPR004367 -
Psa4g3290 707 Pfam Cyclin, N-terminal domain 457 583 IPR006671 -
Psa4g3290 707 MobiDBLite consensus disorder prediction 316 398 - -
Psa4g3290 707 MobiDBLite consensus disorder prediction 316 334 - -
Psa4g3290 707 MobiDBLite consensus disorder prediction 9 23 - -
Psa4g3290 707 PANTHER CYCLINS 244 704 IPR039361 -
Psa4g3290 707 MobiDBLite consensus disorder prediction 70 97 - -
Psa4g3290 707 CDD CYCLIN 486 575 IPR013763 -
Psa4g3290 707 SUPERFAMILY Cyclin-like 447 583 IPR036915 -
Psa4g3290 707 CDD CYCLIN 583 670 IPR013763 -
Psa4g3290 707 PANTHER CYCLIN-B3-1-RELATED 244 704 - -
Psa4g3290 707 SMART cyclin_7 589 671 IPR013763 -
Psa4g3290 707 SMART cyclin_7 492 576 IPR013763 -
Psa4g3290 707 MobiDBLite consensus disorder prediction 1 28 - -
Psa4g3290 707 SUPERFAMILY Cyclin-like 585 703 IPR036915 -
Psa4g3290 707 MobiDBLite consensus disorder prediction 335 359 - -
Psa4g3290 707 SMART Cyclin_C_2 585 702 IPR004367 -
Psa4g3290 707 MobiDBLite consensus disorder prediction 66 97 - -
Psa4g3290 707 MobiDBLite consensus disorder prediction 175 204 - -
Psa4g3290 707 Gene3D - 471 577 - -
Psa4g3290 707 Gene3D - 578 705 - -
Psa4g3290 707 MobiDBLite consensus disorder prediction 122 303 - -
Psa4g3290 707 MobiDBLite consensus disorder prediction 360 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3290 Psa-Chr4 279087479 279096494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3290 25 706 Core Cell Cycle Gene Families AT1G16330 40.825 6.15e-156 464