Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3234 ATGGGCAGTGATGCAATGAGAAGCAAAGAGTACTATACGCTGAAGGATTTAAGTTTCGATTTTAAGGAATATGAAGGAACTTTCTCTTTCTGCTTATGGGTTTATTTCATGAATTCCACTTCGTTCCCTTCTGTCATTCTTCACCAGGTTCACGATGACATTTCTGAAAGTGCTCCTTTTCTCGTTATTAGCGATAATAATAGAATCAATGTTTTCCCAGTTCTTTACTTACACGAAGGAGCTCCTGCAACTTGCATGAGTTCTTGGACAGAAGTTCCGCATGCTACTGTTGATTTTGAGTTTCCTTTGGAAAAATGGGTTCATATTGGATGCGAGGTTTGTCCAAATTATATTCGGCTTCACATTAATGGAGAGGTTGTAGGAGAAAAGTCAATGTCTTCCTTATTAAACAAGGAATCCAATTCAAATAATTTGAAGGGAATAACTTTGGCTAATGTATGTGGAGACAGAAATATTGTGCAGGGTTATGTGCACAATTTTGAAGGATTCCATACTGTTTCTTCTATCAAAGATCATCATTTAAAGGACCCTCCTCTGAAGTTATCAATCGATGAATCATCTGTCTCTGAGGTTGAAGAAGAAAGTGACGGTGTTTGGGGCATTGTTGGTGGAAAAGCATCATGTCGCAGGAATTTTTCTTTAGACGTTGTTTTATCAGATGCATTTGGACAACCTGTACATAATGATAACGAGCAGGTTTTTGCTTCACTTGTATATGCTGACACGGGGGCTCCAGTGGAGAATACAACTGACGATGAAGCTCCTCTTTTGTCTAGCTATGATGGAATTGAATTTTCTTCTTGTGAAAGACCTAGTAAGTTTTTGTTGGGTCGTGCTTCGTTTAAGCTCAGGATATCTCAGCTTTCATCCAAGTGTGATAACAGGTTGTTCCTCATCAGATTTTGTGTGCCAAAATTAGGAAATTATCCTTTCCTTCAGACACATACCCATCCAATTCGATGCATCTCTAGGAGCCGTAATAGTAAATTATCCACGTTGGTGTGGAAAAAGTCAACACATGCTCTGCAAAGACTCAATTTGTCACAGTCTTCAGCAATTGATGATGCGTCATTGGAATGTATGAATTCTAGCCATGAAGAAAAAACCAATCCACTAATGAAGCGGTATAGAGTTGGACTTGACAAGATATCAGTATCAGTTATGGCCGTGCCCACCTTAAAGCAGTCTGGTGTGGCATGTAATTCTCACGTATCGACTGCTAATCAGGTTGAGAATGGGTTTCCTGTAAGCTTGGATGACAGATCTCTTAACTATGAAGAAGCAGACGACTCTCCTTCTGAATCATCAGAGAGTACAGGGGAGAGAAACTCTCCTCCAAATAATATGGAAAATAGAGGATATCCAATATCTGATATGACCATTTTCAAATACTGCCTAGCAGGCTTGGCTGAGAGATCTCATATGCTTAAAGAAATTGCCATATCTGCTTCTGACGAAGACATTTCAATGTTGGCTTATCATGTTTCACACTATTCAGGATGTTCCCACCATAGAAACCAAATATTAATTTCCAAGAGGCTGATAGAAGATGGAACTAATCTTTGGATGGCGATGTCTCCTAACAAAAACCATGTTCCTTGGGAAAGAGCAGTGTATGAGATTGAAGAGAAATTCATGAAGATTGCTTCTTGTGGGTCAAGATCTTTCTCCCATCAGGACTTCGAGATTCTAAGAAGGATTGCTGGATGTGAAGAGTATTTAACACAAGAGAATTTTGAGAAGTTGTGGTGCTGGTTGTACCCTGTAGCGTGTGTATTATCGAGGGACTGGGTAAATCCTATATGGAATTCCATGTCACCTAAATGGATTGAAGGATTCATCACCAAGGAGGAGGCAGAAGCTTCACTTCAAGGTCCGGGAGGATTTCATGAACCTGGTACTTTTATACTACGGTTTCCAACCTCAAGAAGCTGGCCCCATCCAGATGCTGGTAGCCTGACTGTTACTTATGTTGGCAGTGACTACAAACTTCGCCACAGGCTACTTTCGATGGATCATATATATGGCTCTGATAGAATAACTAATGTGAAACCGTTGCAAGATATGCTACTGGCAGAACCTGAACTGACTCGGTTGGGGAGGGTAATAAGAAGGTATTAA 2142 0.4024 MGSDAMRSKEYYTLKDLSFDFKEYEGTFSFCLWVYFMNSTSFPSVILHQVHDDISESAPFLVISDNNRINVFPVLYLHEGAPATCMSSWTEVPHATVDFEFPLEKWVHIGCEVCPNYIRLHINGEVVGEKSMSSLLNKESNSNNLKGITLANVCGDRNIVQGYVHNFEGFHTVSSIKDHHLKDPPLKLSIDESSVSEVEEESDGVWGIVGGKASCRRNFSLDVVLSDAFGQPVHNDNEQVFASLVYADTGAPVENTTDDEAPLLSSYDGIEFSSCERPSKFLLGRASFKLRISQLSSKCDNRLFLIRFCVPKLGNYPFLQTHTHPIRCISRSRNSKLSTLVWKKSTHALQRLNLSQSSAIDDASLECMNSSHEEKTNPLMKRYRVGLDKISVSVMAVPTLKQSGVACNSHVSTANQVENGFPVSLDDRSLNYEEADDSPSESSESTGERNSPPNNMENRGYPISDMTIFKYCLAGLAERSHMLKEIAISASDEDISMLAYHVSHYSGCSHHRNQILISKRLIEDGTNLWMAMSPNKNHVPWERAVYEIEEKFMKIASCGSRSFSHQDFEILRRIAGCEEYLTQENFEKLWCWLYPVACVLSRDWVNPIWNSMSPKWIEGFITKEEAEASLQGPGGFHEPGTFILRFPTSRSWPHPDAGSLTVTYVGSDYKLRHRLLSMDHIYGSDRITNVKPLQDMLLAEPELTRLGRVIRRY* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3234 713 PANTHER SIGNAL TRANSDUCER AND TRANSCRIPTION ACTIVATOR 6 710 - -
Psa4g3234 713 Gene3D SH2 domain 603 711 IPR036860 -
Psa4g3234 713 MobiDBLite consensus disorder prediction 444 459 - -
Psa4g3234 713 MobiDBLite consensus disorder prediction 432 459 - -
Psa4g3234 713 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 6 710 IPR001217 GO:0003700|GO:0006355|GO:0007165
Psa4g3234 713 ProSiteProfiles Src homology 2 (SH2) domain profile. 616 713 IPR000980 -
Psa4g3234 713 SUPERFAMILY Concanavalin A-like lectins/glucanases 19 166 IPR013320 -
Psa4g3234 713 SUPERFAMILY SH2 domain 609 706 IPR036860 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Psa4g3234 None None None