Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3206 ATGCCAGGGAATAAATACAATGGTGATTCAAATCATATACCGGGACGTGTAGAAAGGTTGTTAAGAGATAGAGAGTTGAGAAAAAGAGGAAGTGAAAACAATGACTACTTGGAGCAGGATCAAGAGAAAGATGATGTTGAGAAACTATCATCATCGTCGTTAATAACTGAGAGAAGACAACAAGAAGGAGATGATGCTGTTGGAAAGTATGGTAGTAGTAATAGACAGAGGCTTTTGGTTGTGGCTAACAGATTGCCCGTGTCCGCCATTAGAAAAGGTGAAGATTGTTGGTCTTTGGAGATAAGTGCTGGTGGCCTCGTTAGTGCTCTCCTAGGTGTGAAGGAGTTTGAGGCAAGGTGGATAGGTTGGGCCGGTGTCAATGTTCCAGATGTGGTTGGACAGAAGGCACTCACTAAAGCCTTAGCTGAAAAGAGGTGTATCCCGGTATTTCTAGATGAAGAGATTGTTCATCAATATTACAATGGCTATTGCAACAATATTTTATGGCCTCTTTTCCATTACCTTGGGCTTCCACAAGAAGACCGTCTTGCCACCACGCGTAGTTTCCAATCTCAATTTGTGGCCTATGAGAAAGCAAATCAAATGTTTGCTGATGTTGTGAACCAACATTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTCCTTCCAAAATGCTTGAAGAAATATAACAGTAAAATGAAAGTTGGGTGGTTTCTTCACACCCCTTTTCCTTCTTCTGAAATTCACAGGACACTGCCGTCTCGTTCCGAGCTTTTGCATTCTGTTCTTGCAGCTGATTTAGTTGGTTTTCACACTTATGATTATGCAAGACATTTTGTTAGTGCCTGTACTCGCATCCTTGGACTTGAAGGTACACCTTATGGGGTTGAGCATCAAGGGAAGCTAACTCGAGTTGCCGCCTTTCCAATTGGGATAGATTCAGAACGATTTATACGGGCGCTAGACCTTCCTCAAGTGCAGGAACATATCAAAGAATTACAAGAAAGATTCAAAGGAAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAGAAAATTCTAGCGTTTGAAAAGTTTTTGGAAGAAAATGCTTATTGGCGCGATAAAGTAGTTTTGCTTCAAATCGCCGTCCCAACACGAACAGATGTTCCTGAATATCAAAAGCTTACAAGTCAGGTTCATGAAATTGTTGGTCGCATCAATGGTAGATTTGGATCATTGACTACTGTTCCTATACATCACCTGGATCGCTCTCTTGACTTTCATGAACTATGTGCTCTGTACGCAGTTACGGATGTAGCACTAGTCACATCTTTAAGGGATGGAATGAATCTTGTGAGTTATGAATTTGTGGCCTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCAGCACAATCTCTTGGTGCCGGGGCAATTCTTGTCAATCCCTGGAACATTACAGAAGTTGCTACTGCAATTGCAAGGGCTCTGAATATGCACCCGTCGGAGAGAGAAAAGAGACATAAGCATAATTTTCTTCATGTGAAATCCCACACTGCACAAGAATGGGCAGGAACTTTTGTCAGCGAACTAAATGATACTGTTATCGAGGCACAACTAAGGACTAGACAAGTTCCGCCTAGGCTTCCAACAGAGATTGCAATTAGACGTTATCGACACTCAACTAATAGATTGCTCATATTGGGATTCAATGGAACTTTAACAGAACCGGTTGAGAAAACTGGTGATCAGATTAAAGAAATGGAACTTAAGGTGCATCCAGAACTGAGACAACCCTTAACAGCACTTTGCAATGATCCAAATACCACAGTAGTTGTGCTCAGTGGAAGTGGAAGAAAAGTTCTAGATGATAATTTCAAAGAATATGACCTGTGGTTGGCAGCAGAGAATGGGATGTTTTTACAACCTTCAAAGGGTGAATGGATGACAACAATGCCGGAGCACCTGAATATGGAATGGGTCGACAGCGTGAAACATGTTTTTGAGTACTTCACAGAAAGAACACCGCGGTCACACTTTGATTTTGAAGAAAGGGAAACTTCACTTGTATGGAATTACAAATATGCAGACGTAGAGTTTGGAAAACTTCAAGCAAGAGATATGCTGCAACATCTCTGGACAGGTCCGATTTCTAATTCGTCAGTTGAAGTTGTTCAAGGCAGCCGATCGGTTGAGGTTAGAGCTGTTGGCGTTACAAAGGGAGCAGCTATTGACCGCATCCTAGGAGAGATAGTTCACAGTAAATCAATGACATCGCCGATTGATTATGTTCTTTGTATAGGACATTTTCTCGGAAAGGATGAAGATCTTTATACCTTTTTTGAGCCGGAGCTTCCATCTATTGGTGTTGGTCTTCCGCGAAGTAATAAGTTACCAACAGAAGCAGTTAAGTTTTCAGTTGAGAAGAAACCAGCTTTGAAAATTCCAGCTAGTAGTAAAAATGGAGCAAAGTCATCATCATCTCAAAACAAGGCTCAAAAGGCAGTCTCAAATTCTGATCAGAAGAAAACAAATAATCAAATTTGCAGTTCACTGCGACGCCCGGCTCCAGAAAATATATCACGGAATGTCCTTGACCTTAAGAAGGAGAATTACTTCTCATGCGCTGTTGGACGAAGCCGAACCAATGCTCGATATACACTTGCCTCACCCGATCATGTTGTTGAGTTTCTGATGGAACTAGCGGATGCATTACCGCGCTCTTGTTAA 2760 0.417 MPGNKYNGDSNHIPGRVERLLRDRELRKRGSENNDYLEQDQEKDDVEKLSSSSLITERRQQEGDDAVGKYGSSNRQRLLVVANRLPVSAIRKGEDCWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDVVGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFVAYEKANQMFADVVNQHYEEGDVVWCHDYHLMFLPKCLKKYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPYGVEHQGKLTRVAAFPIGIDSERFIRALDLPQVQEHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTTVPIHHLDRSLDFHELCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVATAIARALNMHPSEREKRHKHNFLHVKSHTAQEWAGTFVSELNDTVIEAQLRTRQVPPRLPTEIAIRRYRHSTNRLLILGFNGTLTEPVEKTGDQIKEMELKVHPELRQPLTALCNDPNTTVVVLSGSGRKVLDDNFKEYDLWLAAENGMFLQPSKGEWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFDFEERETSLVWNYKYADVEFGKLQARDMLQHLWTGPISNSSVEVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLGKDEDLYTFFEPELPSIGVGLPRSNKLPTEAVKFSVEKKPALKIPASSKNGAKSSSSQNKAQKAVSNSDQKKTNNQICSSLRRPAPENISRNVLDLKKENYFSCAVGRSRTNARYTLASPDHVVEFLMELADALPRSC* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3206 919 Gene3D Glycogen Phosphorylase B; 68 323 - -
Psa4g3206 919 MobiDBLite consensus disorder prediction 1 67 - -
Psa4g3206 919 MobiDBLite consensus disorder prediction 15 65 - -
Psa4g3206 919 Pfam Glycosyltransferase family 20 77 542 IPR001830 GO:0003824|GO:0005992
Psa4g3206 919 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 33 911 IPR001830 GO:0003824|GO:0005992
Psa4g3206 919 MobiDBLite consensus disorder prediction 829 863 - -
Psa4g3206 919 MobiDBLite consensus disorder prediction 826 863 - -
Psa4g3206 919 SUPERFAMILY HAD-like 574 762 IPR036412 -
Psa4g3206 919 Gene3D - 664 746 - -
Psa4g3206 919 CDD HAD_TPP 575 801 - -
Psa4g3206 919 Gene3D Glycogen Phosphorylase B; 324 527 - -
Psa4g3206 919 CDD GT20_TPS 77 542 IPR001830 GO:0003824|GO:0005992
Psa4g3206 919 Gene3D - 577 779 IPR023214 -
Psa4g3206 919 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 33 911 - -
Psa4g3206 919 Pfam Trehalose-phosphatase 580 805 IPR003337 GO:0003824|GO:0005992
Psa4g3206 919 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 77 542 IPR012766 GO:0003825|GO:0005992
Psa4g3206 919 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 76 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3206 Psa-Chr4 267704238 267718251 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3206 1 913 Trehalose Biosynthesis Gene Families AT1G78580 76.882 0.0 1449