Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3097 ATGCCAAAATCATCATCTTCTTCTTCCTCCGCCACACCAAAAGAAACACATGAAGTGTTCCTTAGTTTCAGAGGCGACGATACTCGCAAGAAATTCACAAGCCATCTCAATAACGCATTAAGAAGGTTAGACATAAAGACCTACATCGACGACAATCTTGAAAGAGGAGATGAAATATCACAAGCTCTCCTCAAGGCGATCGAGGAAGCGAAACTATCTGTGATCGTGTTTTCGAAAAACTATGCGAACTCAAAATGGTGTTTGGATGAAGTTGTGAAGATACTTGAGTGTAGGAAAAATAATAGTCAAGTTATTTTGCCCGTTTTCTATGAAGTTGATCCTTTCCATGTTCGATATCAAAGGGGAAGTTATGCTGAAGCATTTGCGAAACACGAAGAGCGTTACGCGAATAAAATGAACATGGTGCAAAAATGGAGAGATGCTTTGGGCGAAGCTGCCAATACTTCTGGATGGGATTCCTTGTCCAACATCAACGGAATAGAAGCTGAACTTGTTGAGGAAATTGCGAAGGATGTTCTGCAAAAGCTAAACCACGTTGATGTTAGTGATCTAGACAAGCAAATTACGAAATTAGGGCAACTTGCAAAACTTCAGCTTCAATATTATAAAAGCATATCGGATTCCATTTATGAAGAAAGTTACGACGCAACAGTTGAACGCATAACAGAACTTAAAATGATAAGAAGTATTCGAATGCTTCGTTTGGAACCAGAGATGATTTCATTCATGAAAGGTTCAGAAGCCTATGAAAGATTCTTTTAG 783 0.3895 MPKSSSSSSSATPKETHEVFLSFRGDDTRKKFTSHLNNALRRLDIKTYIDDNLERGDEISQALLKAIEEAKLSVIVFSKNYANSKWCLDEVVKILECRKNNSQVILPVFYEVDPFHVRYQRGSYAEAFAKHEERYANKMNMVQKWRDALGEAANTSGWDSLSNINGIEAELVEEIAKDVLQKLNHVDVSDLDKQITKLGQLAKLQLQYYKSISDSIYEESYDATVERITELKMIRSIRMLRLEPEMISFMKGSEAYERFF* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3097 260 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Psa4g3097 260 Pfam TIR domain 17 192 IPR000157 GO:0007165
Psa4g3097 260 Gene3D - 11 191 IPR035897 -
Psa4g3097 260 PANTHER TMV RESISTANCE PROTEIN N-LIKE 8 255 - -
Psa4g3097 260 PANTHER TYPE DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 8 255 - -
Psa4g3097 260 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 158 IPR035897 -
Psa4g3097 260 SMART till_3 16 155 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3097 Psa-Chr4 253916666 253918390 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3097 18 186 Miscellaneous Gene Families AT5G45220 34.320 7.01e-31 118