Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g3095 ATGAATTTATTTTCTGCAATTTTCCTTGTGCTGCTTATTCCATCTTCACTTGCACAATTATCACAAACTGAAACCCGAATTCTTTTTCAAGTTCAGAAGCTTCTAGAATATCCACAAGTTCTTCAAGGATGGAACAACTGGACAAACTTCTGCTTCCTCCCTCCTTCACCGTCACTCAAAATAGTTTGTTCCAACGGCCGCGTAACCGAATTAACCGTCATCGGAAACCGAACTTCTCCATCTTCACACAGCTCTGAACCTTTTCAAGCACTTTCAGGAACTTTCTCAACTGATTCATTTTTCACTGTTTTAACTAAGCTTTCAAGCTTGAAGGTTCTGTCATTAGTTTCACTAGGTTTATGGGGTACAATACCAGAAAAAATCAATAGGTTTTCATCTCTTGAAATTCTCAACATTAGTTCGAATTTCATTTCCGGTGAAATTCCTGATTCAATATCTTCGATGAGAAATTTGAAAAGTGTTGTTTTCGCTGATAATCTTTTGAGTGGAAATATTCCAGATCTCACAAGTTTATCTTCTCTCGAAGAGGTAAATTTTGATGGAAATAAATTAGGTCCTGAATTTCCTTCAATTGGAAACAATATTGTGAAAATCATCTTGAGAAAAAACTCTATAAGATCTCAGATTCCTCTTGATCTTTCAAATTTCGAAAAGCTTCAAATATTGGATGTTTCTCTAAATAACTTGATTGGGAGAATTCCAAATTCTATATTCTCTCTACCTTCACTTCATTACCTAAATTTGTCTTCAAACAAATTTAGCGGAAACCTCTCGATGAATTCGCCTTGTAGTTCATCTTCATCGTTGAATTATGTTGATATTTCGCATAATTTTCTAGTAGGAAAATTACCTTCATGCATGGTGAAATCGAAGGCGAAAATGTTGTATTCGTGGAACTGTTTCTCGAAGAAAAGTTTGAAAGATGAACAACATTCATTGTCATATTGCAAAAGAGATGCAGCTTTGGCTGTTAAGCCTCCTAACAGAAAGGTGGAGAAGGGATCAAGTATGAAATTAGGTCTTGTGCTTGTTATTGTTGGAGGTGTTGTGGGAATTGCTTGTGTTTTAGCTTTGATCATTGTTTTCATCTTGTGGAAATCGAAACCCGAAAGATTGAATCATAATATGGGTGGATCTGTTGCTCATAAGTTTTCAGAAAAATCAAATATGAATGCAAGACATGTTCCTCAAACAATGAGGCTAGGTACACATGGACAGCCACCATACAATATTTTCACAGAAGAAGAAATTGAAGATGCAACAAACAACTTTGACCAATCAAATCTAATAGGAGAAGGATCACAAGGACAGATATATAAAGGTTGGTTGAGAAATGGTTCAGTGGTCCTGATTAATTGTATAAAGATAAAGCAAAAAGGTTTACCACATAGCATCATGCAACAGTTAGATGTATTACAAAATTTGAGGCATAGACATATGGTGAGTGTTCTAGGACATTGTCTCATTACTCATCAAGATCCTCCTCAAGTAACATGCACAGTCTTCATTGTACATGAATACATCTCAAATGTGTCTTTGAGAGATCAACTTACAGATGGGAAAAAGAAGGATATGCTGAAATGGCCACAAAGAATGGCAATAAGCATAGGAATTGCAAGAGGAGTTCAGTTCTTACATACAGGTGTTGCTCCTGGAGTATTTGGCAACAATTTAAAGATTGAGAATATTTTGTTGGATGATAGTCTCAATGCAAAAGTCAGTGGATACAGAATTCCATTGCCATCCAAGAGCACAGTTAATGAAGAAAGTGATGCAGAAAAAGAAGATATTTATCAGCTAGGTGTTATTCTACTTGAAGTCATTACTGGCAGACAAATTACATCCTCCAGTGAAGTAGAGCAGCTCAAGGATGAGCTTGAAAGAAGTTCATCAGAACCACCATCATCAATACTAAGAAGTACAATTGATCCTTCTCTGAGAGGGAGTTATGCCTATGAATCAATGAATACTGCAGTTCAGATTACCATCAATTGTCTCTCTAAGATTTCTAGTAAGCGTCCTTCAATAGAGGATGTTCTTTGGAATTTACAGTATTCAATGCAAGTTCAAGAGTCTTGGACTAGCAGTGGGAATCTCAGCACAAAATTTTAA 2133 0.3605 MNLFSAIFLVLLIPSSLAQLSQTETRILFQVQKLLEYPQVLQGWNNWTNFCFLPPSPSLKIVCSNGRVTELTVIGNRTSPSSHSSEPFQALSGTFSTDSFFTVLTKLSSLKVLSLVSLGLWGTIPEKINRFSSLEILNISSNFISGEIPDSISSMRNLKSVVFADNLLSGNIPDLTSLSSLEEVNFDGNKLGPEFPSIGNNIVKIILRKNSIRSQIPLDLSNFEKLQILDVSLNNLIGRIPNSIFSLPSLHYLNLSSNKFSGNLSMNSPCSSSSSLNYVDISHNFLVGKLPSCMVKSKAKMLYSWNCFSKKSLKDEQHSLSYCKRDAALAVKPPNRKVEKGSSMKLGLVLVIVGGVVGIACVLALIIVFILWKSKPERLNHNMGGSVAHKFSEKSNMNARHVPQTMRLGTHGQPPYNIFTEEEIEDATNNFDQSNLIGEGSQGQIYKGWLRNGSVVLINCIKIKQKGLPHSIMQQLDVLQNLRHRHMVSVLGHCLITHQDPPQVTCTVFIVHEYISNVSLRDQLTDGKKKDMLKWPQRMAISIGIARGVQFLHTGVAPGVFGNNLKIENILLDDSLNAKVSGYRIPLPSKSTVNEESDAEKEDIYQLGVILLEVITGRQITSSSEVEQLKDELERSSSEPPSSILRSTIDPSLRGSYAYESMNTAVQITINCLSKISSKRPSIEDVLWNLQYSMQVQESWTSSGNLSTKF* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g3095 710 ProSiteProfiles Protein kinase domain profile. 431 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g3095 710 Pfam Leucine Rich Repeat 133 154 IPR001611 GO:0005515
Psa4g3095 710 Pfam Leucine Rich Repeat 225 246 IPR001611 GO:0005515
Psa4g3095 710 Gene3D Transferase(Phosphotransferase) domain 1 515 593 - -
Psa4g3095 710 Gene3D Transferase(Phosphotransferase) domain 1 594 705 - -
Psa4g3095 710 Gene3D Ribonuclease Inhibitor 21 201 IPR032675 -
Psa4g3095 710 SUPERFAMILY L domain-like 91 295 - -
Psa4g3095 710 Pfam Protein tyrosine and serine/threonine kinase 434 626 IPR001245 GO:0004672|GO:0006468
Psa4g3095 710 SUPERFAMILY Protein kinase-like (PK-like) 411 690 IPR011009 -
Psa4g3095 710 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 6 703 - -
Psa4g3095 710 PANTHER OS07G0166700 PROTEIN 6 703 IPR045272 GO:0004714|GO:0006468
Psa4g3095 710 Gene3D Ribonuclease Inhibitor 202 327 IPR032675 -
Psa4g3095 710 Gene3D Phosphorylase Kinase; domain 1 391 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g3095 Psa-Chr4 253521711 253526205 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g3095 16 630 Miscellaneous Gene Families AT2G02780 47.473 2.46e-176 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Psa4g3095 PK_Tyr_Ser-Thr 7.3e-15 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3095 4 253521711 253526205 Psa4g3095 4 253521711 253526205 ECH