Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1168 ATGAATATGCTGATAAAGAGAGTCATTGCAATCAAGAATCCAAGGGGTGATGATAATAATAATAATAAACTCTCAGATTTGGAAACCCTCACCGACAAATGTACAACATCCCCTTTGACTTTGATGCGTGTAATGGCTTTCTTCGTCGTTTCTTTCATGCTCTTCTCCGTTCTCTTCTCACTCTCCGTCGTTCTTCGAGACCCTCCCTCTGATGCCGCTATTTCATCTACAACTACTCTCTTCCAACTCAATCAGGGTTTGGGCAGTGATGACTTTGATTCTGTTGAGTTGCTAAATGATAAACTGCTCGGTGGCCTTCTCGCTGATGGATTTGACGAAAAATCTTGTCTCAGCAGGTATCAGTCAGCCATTTTCGGCAAAGGACTATCAGGAAAACCTTCTTCTTACCTTATTTCTAGACTGAGAAAATATGAAGCCCGACACAAACAATGTGGACCTTATACTGAATCTTATAACAAAACGGTGAAAGAACTCGGTTCTGGTCAATTCTCTGAGTCCGTGGATTGTAAATATGTAGTATGGATTTCGTTTAGTGGGTTAGGAAATAGGATATTGACCCTAGTTTCAGCATTTCTTTACGCTCTCCTCACTGATCGTGTTCTACTAGTTGACCCGGGAGTCGATATGACTGATCTTTTTTGTGAACCATTTCCTGACGCTTCCTGGTTTGTCCCTCCTGATTTTCCTCTTAACAGTCATTTGAATAATTTCAACCAGGAATCGAATCAGTGTCACGGGAAAATACTGAAAACAAAATCAATCACAAATTCCACTGTGCCATCTTTTGTTTATCTTCATCTAGCCCATGATTACGATGATCATGACAAGCTTTTCTTCTGTGATGAAGAGCAACTTTTTCTCCAAAATGTACCTTTGTTGATTATGAAAACCGATAATTATTTCATCCCATCTCTGTTCTTGATGCCATCTTTTGAGCAGGAGTTGAATGATCTCTTCCCAAAGAAAGAAAAAGTTTTCCATTTCTTGGGTAGATATCTGTTACACCCCACAAACAATGTGTGGGGACTTGTCGTCAGATACTATGATGCATACTTAGCTAAAGTTGATGAAAGAATAGGCATACAAATCAGAGTATTTGACACCGATCCCGGTCCATTTCAACATGTACTCGATCAGGTCTTAGCTTGTACTTTGAAGGAGAGTATTTTGCCTGATGTAAACCGCGAGCAGAACATTAATAGTTCATCAGGAACACCAAAGTCAAAAGCTGTACTGATAACATCGTTAAGTTCTGGTTATTTCGAAAAGGTAAGAGACATGTATTGGGAATTTCCTACAGAAACAGGAGAAGTGGTTGGCATTTATCAGCCAAGCCATGAAGGTTATCAACAAACTCAGAAGCAATTTCACAACCAAAAAGCCTGGGCAGAAATGTATCTCTTAAGCTTAACTGATGTGCTAGTTACTAGCTCATGGTCTACTTTTGGATACGTGGCTCAGGGGCTTGGAGGGTTGAAACCATGGATACTCTACAAACCAGAGAATCGAACGGCCCCAAATCCGCCTTGTCAACGTGCCATGTCAATGGAGCCATGTTTTCATGCTCCTCCTTTTTATGACTGCAAGGCTAAGAGAGGAACTGACACTGGTGCACTTGTTCCACATGTAAGGCACTGTGAGGATATGAGTTGGGGCCTTAAGCTCGTAGACAATTAG 1698 0.4099 MNMLIKRVIAIKNPRGDDNNNNKLSDLETLTDKCTTSPLTLMRVMAFFVVSFMLFSVLFSLSVVLRDPPSDAAISSTTTLFQLNQGLGSDDFDSVELLNDKLLGGLLADGFDEKSCLSRYQSAIFGKGLSGKPSSYLISRLRKYEARHKQCGPYTESYNKTVKELGSGQFSESVDCKYVVWISFSGLGNRILTLVSAFLYALLTDRVLLVDPGVDMTDLFCEPFPDASWFVPPDFPLNSHLNNFNQESNQCHGKILKTKSITNSTVPSFVYLHLAHDYDDHDKLFFCDEEQLFLQNVPLLIMKTDNYFIPSLFLMPSFEQELNDLFPKKEKVFHFLGRYLLHPTNNVWGLVVRYYDAYLAKVDERIGIQIRVFDTDPGPFQHVLDQVLACTLKESILPDVNREQNINSSSGTPKSKAVLITSLSSGYFEKVRDMYWEFPTETGEVVGIYQPSHEGYQQTQKQFHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPNPPCQRAMSMEPCFHAPPFYDCKAKRGTDTGALVPHVRHCEDMSWGLKLVDN* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1168 565 PANTHER FUCOSYLTRANSFERASE 2-RELATED 27 565 IPR004938 GO:0008107|GO:0016020|GO:0042546
Psa4g1168 565 Gene3D - 174 230 - -
Psa4g1168 565 Pfam Xyloglucan fucosyltransferase 97 536 IPR004938 GO:0008107|GO:0016020|GO:0042546
Psa4g1168 565 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 27 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1168 Psa-Chr4 83225812 83228236 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1168 42 563 Xyloglucan Fucosyltransferase1 AT2G03220 62.715 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1168 K13681 - gmx:100803305 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1168 4 83225812 83228236 Psa4g1168 4 83225812 83228236 ECH