Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3281 ATGGTTTATACTTCTCTCCCACCATATATGGATCCAACCAATTGGCATCAACAGCAACAAAATCATCATCAAGTGGCTAACACTAGTGTCAACACTCCTTTTCTAATTCCGCCGCCACAACCTCAACCATCGAACCTGACACCTTCGCAACCTCATGGAAGCTCGATCAGGCCGGGTTCGATGGCTGATAGGGCTAGGATGGCGAACATACCTATGCAAGAACCGTCACAAAAATGTCCAAGATGTGATTCAACCAACACAAAATTTTGCTACTTCAACAACTACAGTCTCTCACAGCCTCGCCACTTCTGCAAGACATGTAGAAGGTATTGGACACGAGGCGGCGCGCTTAGAAGTGTCCCGGTCGGGGGTGGTTGTCGGAGAAACAAAAGAACTAAGTCAAGCAGTAACAACACCTCCAAGTCACCGGTTAGCTCCGATCGTCAAACTAGCTCGGCGAACAACTCTCCTGCAGTACTCAGCTCCCAGACGCCACCGCCGATGAGATTCATGCCTCCTTTACATCAACTCGGCGATCATCACCTCGGCGAAATAGGTCTAAACTATAATTTTCCTAGTCAAATGGGAGGTGTGGGAGACTTGAATTTCCATATTGGAAGCTCCTTAGGTAACGGAAGTCTCGGTGGTGGTGGTCGAAGTGGTGGTTCTGCTTCGATTTTACCTACCGGAAACTTCGAGCAATGGAGAATGCCTCAAACTCATCAATTTCCATTCTTAACAAGCTTAGAAGCTTCTTCTTCTCATGGATTGTTGTATCCATTTGGTGGTAATGATCAAGAACATGCATATGGTGGTGTCTCTAAGGTATTAACATCTTCAAATGTGAAAATGGAAGAGAATCAATCTAAACAATTCTTGGGAATGATCAATAGTAACAACAACAACAACATTAACAACAACAATAATAATAATCCTAATAGTGAACAATATTGGAGTGCTTCTAATGGTGGTGCTACTTCAGCTTGGAATGATCTTTCATCACCTTTTAACTCTTCTTCAGCTACTACAAATTCCAACTATAGAACTTAA 1050 0.4352 MVYTSLPPYMDPTNWHQQQQNHHQVANTSVNTPFLIPPPQPQPSNLTPSQPHGSSIRPGSMADRARMANIPMQEPSQKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRTKSSSNNTSKSPVSSDRQTSSANNSPAVLSSQTPPPMRFMPPLHQLGDHHLGEIGLNYNFPSQMGGVGDLNFHIGSSLGNGSLGGGGRSGGSASILPTGNFEQWRMPQTHQFPFLTSLEASSSHGLLYPFGGNDQEHAYGGVSKVLTSSNVKMEENQSKQFLGMINSNNNNNINNNNNNNPNSEQYWSASNGGATSAWNDLSSPFNSSSATTNSNYRT* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3281 349 MobiDBLite consensus disorder prediction 122 165 - -
Psa3g3281 349 MobiDBLite consensus disorder prediction 129 163 - -
Psa3g3281 349 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 8 342 IPR045174 GO:0003700|GO:0006355
Psa3g3281 349 Pfam Dof domain, zinc finger 76 131 IPR003851 GO:0003677|GO:0006355
Psa3g3281 349 ProSiteProfiles Zinc finger Dof-type profile. 77 131 IPR003851 GO:0003677|GO:0006355
Psa3g3281 349 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 8 342 - -
Psa3g3281 349 ProSitePatterns Zinc finger Dof-type signature. 79 115 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3281 Psa-Chr3 277551030 277553335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3281 49 334 C2C2-Dof Transcription Factor Family AT3G55370 41.639 5.13e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Psa3g3281 zf-Dof 2.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3281 - - gmx:100796820 347.051