LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa2g2963	ATGAAGATGGAGAAATACCCGAGAGATCTGTTAGAGAGACTCTTTGTTTCAAGTGGTGGAAGTGATAACAATAATCATAACCCAACAACAACAACAACAACATCAGAACAACATCATCGTCAACAGTATCGTCAATATCTTAGTCAGAACCAGCATGGTGAACAAGAAGAGGAGGAAGAAGAGGATGAAGATGAAGGGATTGAACTGAATCTTGGTCTTTCTTTAGGAGGTAGATTTGGTGTTGACAAGCATGCTAAGAATAAGAAACTTATTCGATCTTCTTCCGTTGTTGGAACAATGCCTTTGCTCCGGGAAGATATTGCGGCGGCCGCCGGAGTGGCTTCGCCAACTCCGGCATATCCGACTCTCGTGAGAGCTTCGTCGTTACCGACGGAGACAGAAGAGGAGTGGCGGAAGAGGAAGGAGTTGCAGACGCTGCGGAGGATGGAGGCTAAGAGACGGAGGTCAGAGAAGCAGAGAGTTTTCGTTTCAAAGTCAGAGAAAGATTCCATTTCCACTGTGGCACCTACAGGTGGTGGTGGAGGTGGTTGTATAGAGGAAGTAGAGGGTGCTAATGTTAGTGCAAGTGCAACAATGGTGTTGAACAGATCAACCGCTGCTAGTAGTACTATGCCACCTTTTGGATTACCGAATTGGGCTGTTGCATCAAAGCAAGTTGTTCTTGGTGATGTGCTAGGGAGAGGGAAAATTGGGGTTGGTTTTCAAGGATTGATGTTTTCACAACCATCTTCTCAAGGTTCAGTAGAATCACAAGGTGGAAGTTCTTCATCAGTGTCTGAAATGGATAGCAAACCTTTTCTAGGATCAAGCAGTTGTGGCGAAGCAAGAAGCCCAGCTAGTAATCAGTCCTTACAGGAAAGAAGCAACCAGGACTCCGTCGGTTCATCAGGAGTGCCAAAGCCGAAAGATAATTTGACAAGAACAAGTTCGAGATCCGAGGTAATGGAGAGTGCATCTAAAAAGCCTCATCCCACTCAAAATATTGGGAAGGAAATTGGAACAAACTCAATGGAAGACATGCCTTGTGTATTTACGAAAGGGTGTGGTCCTAATGGAAGAAGAATTGAGGGAATCTTATATAAATATGGCAAAGGGGAAGAAGTGAGGATAATGTGTGTGTGCCATGGAAACTTTCTGTCTCCAGCTGAGTTTGTTAAGCATGCTGGTGGTGAAGATGTTGCTCACCCTCTTAGACATATTGTTGTTAACCCATCTCCTGCCCCCTTTTTGTGA	1254	0.4482	MKMEKYPRDLLERLFVSSGGSDNNNHNPTTTTTTSEQHHRQQYRQYLSQNQHGEQEEEEEEDEDEGIELNLGLSLGGRFGVDKHAKNKKLIRSSSVVGTMPLLREDIAAAAGVASPTPAYPTLVRASSLPTETEEEWRKRKELQTLRRMEAKRRRSEKQRVFVSKSEKDSISTVAPTGGGGGGCIEEVEGANVSASATMVLNRSTAASSTMPPFGLPNWAVASKQVVLGDVLGRGKIGVGFQGLMFSQPSSQGSVESQGGSSSSVSEMDSKPFLGSSSCGEARSPASNQSLQERSNQDSVGSSGVPKPKDNLTRTSSRSEVMESASKKPHPTQNIGKEIGTNSMEDMPCVFTKGCGPNGRRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHAGGEDVAHPLRHIVVNPSPAPFL*	418

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa2g2963	417	MobiDBLite	consensus disorder prediction	326	340	-	-
	Psa2g2963	417	Coils	Coil	139	159	-	-
	Psa2g2963	417	MobiDBLite	consensus disorder prediction	280	312	-	-
	Psa2g2963	417	Pfam	Putative nuclear localisation signal	123	270	IPR032310	-
	Psa2g2963	417	Pfam	Tify domain binding domain	375	409	IPR032308	-
	Psa2g2963	417	Coils	Coil	43	63	-	-
	Psa2g2963	417	MobiDBLite	consensus disorder prediction	249	340	-	-
	Psa2g2963	417	MobiDBLite	consensus disorder prediction	249	273	-	-
	Psa2g2963	417	Pfam	Ethylene-responsive binding factor-associated repression	62	98	IPR012463	-
	Psa2g2963	417	MobiDBLite	consensus disorder prediction	17	50	-	-
	Psa2g2963	417	MobiDBLite	consensus disorder prediction	1	66	-	-
	Psa2g2963	417	PANTHER	AFP HOMOLOG 2	3	414	IPR031307	GO:0007165
	Psa2g2963	417	PANTHER	NINJA-FAMILY PROTEIN AFP1	3	414	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa2g2963	Psa-Chr2	338399476	338402943	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa2g2963	2	338399476	338402943	Psa2g2963	2	338399476	338402943	ECH